Protein–RNA interactions for Protein: Q9Y2T2

AP3M1, AP-3 complex subunit mu-1, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M1Q9Y2T2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.58■□□□□ 0.88
AP3M1Q9Y2T2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3M1Q9Y2T2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.58■□□□□ 0.88
AP3M1Q9Y2T2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3M1Q9Y2T2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3M1Q9Y2T2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP3M1Q9Y2T2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3M1Q9Y2T2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 YBX1P4-201ENST00000392794 808 ntBASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3M1Q9Y2T2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 AC004687.1-201ENST00000579003 1625 ntBASIC20.52■□□□□ 0.88
AP3M1Q9Y2T2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.52■□□□□ 0.87
AP3M1Q9Y2T2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
AP3M1Q9Y2T2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
AP3M1Q9Y2T2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms