Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.37■□□□□ 0.85
CNIH4Q9P003 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.37■□□□□ 0.85
CNIH4Q9P003 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNIH4Q9P003 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNIH4Q9P003 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNIH4Q9P003 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNIH4Q9P003 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.36■□□□□ 0.85
CNIH4Q9P003 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNIH4Q9P003 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CNIH4Q9P003 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNIH4Q9P003 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNIH4Q9P003 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.36■□□□□ 0.85
CNIH4Q9P003 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNIH4Q9P003 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNIH4Q9P003 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.36■□□□□ 0.85
CNIH4Q9P003 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNIH4Q9P003 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNIH4Q9P003 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.36■□□□□ 0.85
CNIH4Q9P003 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.36■□□□□ 0.85
CNIH4Q9P003 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNIH4Q9P003 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CNIH4Q9P003 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CNIH4Q9P003 RASA4CP-201ENST00000424092 1398 ntBASIC20.35■□□□□ 0.85
CNIH4Q9P003 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNIH4Q9P003 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CNIH4Q9P003 AC233992.3-201ENST00000607491 485 ntBASIC20.35■□□□□ 0.85
CNIH4Q9P003 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNIH4Q9P003 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CNIH4Q9P003 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNIH4Q9P003 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNIH4Q9P003 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CNIH4Q9P003 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNIH4Q9P003 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CNIH4Q9P003 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CNIH4Q9P003 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNIH4Q9P003 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.34■□□□□ 0.85
CNIH4Q9P003 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.34■□□□□ 0.85
CNIH4Q9P003 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNIH4Q9P003 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.34■□□□□ 0.85
CNIH4Q9P003 AC008764.7-201ENST00000593779 1081 ntBASIC20.34■□□□□ 0.85
CNIH4Q9P003 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNIH4Q9P003 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.34■□□□□ 0.85
CNIH4Q9P003 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CNIH4Q9P003 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNIH4Q9P003 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNIH4Q9P003 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNIH4Q9P003 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNIH4Q9P003 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNIH4Q9P003 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.34■□□□□ 0.85
CNIH4Q9P003 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.33■□□□□ 0.85
CNIH4Q9P003 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
CNIH4Q9P003 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNIH4Q9P003 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.33■□□□□ 0.85
CNIH4Q9P003 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.33■□□□□ 0.85
CNIH4Q9P003 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNIH4Q9P003 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.33■□□□□ 0.85
CNIH4Q9P003 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNIH4Q9P003 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.33■□□□□ 0.84
CNIH4Q9P003 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.33■□□□□ 0.84
CNIH4Q9P003 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNIH4Q9P003 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.33■□□□□ 0.84
CNIH4Q9P003 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNIH4Q9P003 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.32■□□□□ 0.84
CNIH4Q9P003 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.32■□□□□ 0.84
CNIH4Q9P003 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CNIH4Q9P003 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.32■□□□□ 0.84
CNIH4Q9P003 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.32■□□□□ 0.84
CNIH4Q9P003 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.32■□□□□ 0.84
CNIH4Q9P003 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CNIH4Q9P003 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNIH4Q9P003 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.32■□□□□ 0.84
CNIH4Q9P003 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CNIH4Q9P003 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CNIH4Q9P003 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CNIH4Q9P003 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CNIH4Q9P003 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CNIH4Q9P003 AC099791.1-201ENST00000416440 715 ntBASIC20.31■□□□□ 0.84
CNIH4Q9P003 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.31■□□□□ 0.84
CNIH4Q9P003 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.31■□□□□ 0.84
CNIH4Q9P003 CA15P2-201ENST00000611168 834 ntBASIC20.31■□□□□ 0.84
CNIH4Q9P003 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 ESRRAP2-201ENST00000418437 1549 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms