Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
RDH8Q9NYR8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.7■□□□□ 0.58
RDH8Q9NYR8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RDH8Q9NYR8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RDH8Q9NYR8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RDH8Q9NYR8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 KRT18P24-201ENST00000344739 1156 ntBASIC18.69■□□□□ 0.58
RDH8Q9NYR8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 PVT1_1.1-201ENST00000615125 194 ntBASIC18.69■□□□□ 0.58
RDH8Q9NYR8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RDH8Q9NYR8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 AF131216.4-201ENST00000638924 1588 ntBASIC18.68■□□□□ 0.58
RDH8Q9NYR8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 MIR4281-201ENST00000580852 62 ntBASIC18.68■□□□□ 0.58
RDH8Q9NYR8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.68■□□□□ 0.58
RDH8Q9NYR8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 TSPY13P-201ENST00000338964 914 ntBASIC18.67■□□□□ 0.58
RDH8Q9NYR8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 AC010980.1-201ENST00000587192 1142 ntBASIC18.67■□□□□ 0.58
RDH8Q9NYR8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RDH8Q9NYR8 AC007952.6-201ENST00000573168 2673 ntBASIC18.67■□□□□ 0.58
RDH8Q9NYR8 AC003957.1-201ENST00000625108 2673 ntBASIC18.67■□□□□ 0.58
RDH8Q9NYR8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RDH8Q9NYR8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RDH8Q9NYR8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RDH8Q9NYR8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.64■□□□□ 0.58
RDH8Q9NYR8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH8Q9NYR8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms