Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLN6Q9NWW5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLN6Q9NWW5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLN6Q9NWW5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLN6Q9NWW5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 NTF6A-201ENST00000591175 560 ntBASIC19.85■□□□□ 0.77
CLN6Q9NWW5 BHLHE23-202ENST00000612929 1109 ntBASIC19.85■□□□□ 0.77
CLN6Q9NWW5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLN6Q9NWW5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 AC005229.4-201ENST00000610085 2198 ntBASIC19.84■□□□□ 0.77
CLN6Q9NWW5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 ABHD17AP5-201ENST00000580133 923 ntBASIC19.84■□□□□ 0.77
CLN6Q9NWW5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 AC074183.2-201ENST00000623112 922 ntBASIC19.84■□□□□ 0.77
CLN6Q9NWW5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.84■□□□□ 0.77
CLN6Q9NWW5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLN6Q9NWW5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CLN6Q9NWW5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLN6Q9NWW5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLN6Q9NWW5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLN6Q9NWW5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLN6Q9NWW5 LINC01960-201ENST00000563759 1884 ntBASIC19.83■□□□□ 0.76
CLN6Q9NWW5 AC244015.2-201ENST00000616358 1861 ntBASIC19.83■□□□□ 0.76
CLN6Q9NWW5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLN6Q9NWW5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLN6Q9NWW5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLN6Q9NWW5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.83■□□□□ 0.76
CLN6Q9NWW5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLN6Q9NWW5 LINC01529-204ENST00000636474 1715 ntBASIC19.82■□□□□ 0.76
CLN6Q9NWW5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CLN6Q9NWW5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.8■□□□□ 0.76
CLN6Q9NWW5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms