Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 AC136469.2-201ENST00000623944 1028 ntBASIC21.1■□□□□ 0.97
SOX17Q9H6I2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 AC008764.7-201ENST00000593779 1081 ntBASIC21.09■□□□□ 0.97
SOX17Q9H6I2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SOX17Q9H6I2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 AC105265.2-201ENST00000467189 838 ntBASIC21.08■□□□□ 0.97
SOX17Q9H6I2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOX17Q9H6I2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.08■□□□□ 0.96
SOX17Q9H6I2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SOX17Q9H6I2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SOX17Q9H6I2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.08■□□□□ 0.96
SOX17Q9H6I2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SOX17Q9H6I2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 AC091305.1-201ENST00000479476 895 ntBASIC21.07■□□□□ 0.96
SOX17Q9H6I2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOX17Q9H6I2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 AC027682.1-201ENST00000562846 899 ntBASIC21.06■□□□□ 0.96
SOX17Q9H6I2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.06■□□□□ 0.96
SOX17Q9H6I2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SOX17Q9H6I2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.05■□□□□ 0.96
SOX17Q9H6I2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SOX17Q9H6I2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SOX17Q9H6I2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SOX17Q9H6I2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SOX17Q9H6I2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.05■□□□□ 0.96
SOX17Q9H6I2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.05■□□□□ 0.96
SOX17Q9H6I2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SOX17Q9H6I2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 AC099791.1-201ENST00000416440 715 ntBASIC21.04■□□□□ 0.96
SOX17Q9H6I2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 CA15P2-201ENST00000611168 834 ntBASIC21.04■□□□□ 0.96
SOX17Q9H6I2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms