Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF39Q9H2S5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF39Q9H2S5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF39Q9H2S5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.89■■□□□ 1.42
RNF39Q9H2S5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.89■■□□□ 1.42
RNF39Q9H2S5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.89■■□□□ 1.42
RNF39Q9H2S5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF39Q9H2S5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
RNF39Q9H2S5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RNF39Q9H2S5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
RNF39Q9H2S5 AC034268.1-201ENST00000441047 882 ntBASIC23.89■■□□□ 1.41
RNF39Q9H2S5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC23.89■■□□□ 1.41
RNF39Q9H2S5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.89■■□□□ 1.41
RNF39Q9H2S5 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC23.89■■□□□ 1.41
RNF39Q9H2S5 AC105233.4-201ENST00000642045 216 ntBASIC23.89■■□□□ 1.41
RNF39Q9H2S5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF39Q9H2S5 AL022393.1-201ENST00000625142 1677 ntBASIC23.89■■□□□ 1.41
RNF39Q9H2S5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF39Q9H2S5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 AC123595.1-201ENST00000440769 1046 ntBASIC23.88■■□□□ 1.41
RNF39Q9H2S5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF39Q9H2S5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.87■■□□□ 1.41
RNF39Q9H2S5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF39Q9H2S5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF39Q9H2S5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 HMGB3P14-201ENST00000494195 599 ntBASIC23.85■■□□□ 1.41
RNF39Q9H2S5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 CCDC92B-201ENST00000575506 885 ntBASIC23.85■■□□□ 1.41
RNF39Q9H2S5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
RNF39Q9H2S5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF39Q9H2S5 AC092068.2-201ENST00000590491 1708 ntBASIC23.84■■□□□ 1.41
RNF39Q9H2S5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF39Q9H2S5 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.84■■□□□ 1.41
RNF39Q9H2S5 KRT18P5-201ENST00000436075 1291 ntBASIC23.84■■□□□ 1.41
RNF39Q9H2S5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF39Q9H2S5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF39Q9H2S5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF39Q9H2S5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.84■■□□□ 1.41
RNF39Q9H2S5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF39Q9H2S5 AL137246.1-201ENST00000607072 977 ntBASIC23.84■■□□□ 1.41
RNF39Q9H2S5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF39Q9H2S5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF39Q9H2S5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RNF39Q9H2S5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF39Q9H2S5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF39Q9H2S5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF39Q9H2S5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms