Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 AP003097.1-201ENST00000530657 1135 ntBASIC21.26■□□□□ 0.99
SPTBN4Q9H254 C2orf69P4-201ENST00000565394 541 ntBASIC21.26■□□□□ 0.99
SPTBN4Q9H254 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.26■□□□□ 0.99
SPTBN4Q9H254 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.26■□□□□ 0.99
SPTBN4Q9H254 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPTBN4Q9H254 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPTBN4Q9H254 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SPTBN4Q9H254 BX276092.2-201ENST00000417668 665 ntBASIC21.26■□□□□ 0.99
SPTBN4Q9H254 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.26■□□□□ 0.99
SPTBN4Q9H254 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SPTBN4Q9H254 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.26■□□□□ 0.99
SPTBN4Q9H254 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.25■□□□□ 0.99
SPTBN4Q9H254 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SPTBN4Q9H254 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.24■□□□□ 0.99
SPTBN4Q9H254 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPTBN4Q9H254 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPTBN4Q9H254 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.24■□□□□ 0.99
SPTBN4Q9H254 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPTBN4Q9H254 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPTBN4Q9H254 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.24■□□□□ 0.99
SPTBN4Q9H254 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 POU5F1P4-201ENST00000413175 1085 ntBASIC21.23■□□□□ 0.99
SPTBN4Q9H254 TMPOP1-202ENST00000424642 1267 ntBASIC21.23■□□□□ 0.99
SPTBN4Q9H254 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 ERN1-208ENST00000606895 2068 ntBASIC21.23■□□□□ 0.99
SPTBN4Q9H254 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.23■□□□□ 0.99
SPTBN4Q9H254 AC012618.2-201ENST00000428058 849 ntBASIC21.23■□□□□ 0.99
SPTBN4Q9H254 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 AC091874.3-201ENST00000512672 1195 ntBASIC21.22■□□□□ 0.99
SPTBN4Q9H254 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPTBN4Q9H254 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SPTBN4Q9H254 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.21■□□□□ 0.99
SPTBN4Q9H254 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPTBN4Q9H254 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.21■□□□□ 0.99
SPTBN4Q9H254 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SPTBN4Q9H254 AC068338.2-201ENST00000563278 1430 ntBASIC21.21■□□□□ 0.99
SPTBN4Q9H254 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.21■□□□□ 0.99
SPTBN4Q9H254 AL359736.2-201ENST00000621992 437 ntBASIC21.21■□□□□ 0.99
SPTBN4Q9H254 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPTBN4Q9H254 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 AC012306.2-201ENST00000609350 630 ntBASIC21.2■□□□□ 0.98
SPTBN4Q9H254 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPTBN4Q9H254 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms