Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CYSTM1Q9H1C7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CYSTM1Q9H1C7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CYSTM1Q9H1C7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CYSTM1Q9H1C7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CYSTM1Q9H1C7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CYSTM1Q9H1C7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 AC079630.1-202ENST00000618127 1840 ntBASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CYSTM1Q9H1C7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CYSTM1Q9H1C7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 AC099398.1-201ENST00000567919 2776 ntBASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC12.8□□□□□ -0.36
CYSTM1Q9H1C7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms