Protein–RNA interactions for Protein: Q9GZM5

YIPF3, Protein YIPF3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3Q9GZM5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF3Q9GZM5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF3Q9GZM5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
YIPF3Q9GZM5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 AC026202.3-201ENST00000600805 1127 ntBASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.69■□□□□ 0.9
YIPF3Q9GZM5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.68■□□□□ 0.9
YIPF3Q9GZM5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF3Q9GZM5 AC080038.3-201ENST00000623346 1952 ntBASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF3Q9GZM5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF3Q9GZM5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
YIPF3Q9GZM5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
YIPF3Q9GZM5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
YIPF3Q9GZM5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
YIPF3Q9GZM5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.64■□□□□ 0.9
YIPF3Q9GZM5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
YIPF3Q9GZM5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF3Q9GZM5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.63■□□□□ 0.89
YIPF3Q9GZM5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF3Q9GZM5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
YIPF3Q9GZM5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
YIPF3Q9GZM5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF3Q9GZM5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms