Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF4Q9BUZ4 C17orf82-201ENST00000623772 1530 ntBASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF4Q9BUZ4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 AC091305.1-201ENST00000479476 895 ntBASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 AC011298.3-201ENST00000615796 283 ntBASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 AC241377.3-202ENST00000626088 1088 ntBASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 AC241585.3-202ENST00000628937 1088 ntBASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 AC245100.8-202ENST00000629247 1058 ntBASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF4Q9BUZ4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAF4Q9BUZ4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAF4Q9BUZ4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF4Q9BUZ4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF4Q9BUZ4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAF4Q9BUZ4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF4Q9BUZ4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRAF4Q9BUZ4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
TRAF4Q9BUZ4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF4Q9BUZ4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 HLA-L-211ENST00000482052 1765 ntBASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 AC092068.2-201ENST00000590491 1708 ntBASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF4Q9BUZ4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF4Q9BUZ4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 AC026271.2-201ENST00000428091 497 ntBASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF4Q9BUZ4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms