Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 EXOG-217ENST00000630638 197 ntTSL 5 BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 AC144652.1-201ENST00000609974 1624 ntBASIC12.9□□□□□ -0.34
LIMD2Q9BT23 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 AC079630.1-202ENST00000618127 1840 ntBASIC12.9□□□□□ -0.34
LIMD2Q9BT23 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LIMD2Q9BT23 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LIMD2Q9BT23 AC137767.1-201ENST00000602918 1920 ntBASIC12.9□□□□□ -0.35
LIMD2Q9BT23 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 CD72-202ENST00000378430 585 ntTSL 3 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 AC092667.1-201ENST00000434301 2586 ntBASIC12.89□□□□□ -0.35
LIMD2Q9BT23 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIMD2Q9BT23 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC12.88□□□□□ -0.35
LIMD2Q9BT23 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC12.88□□□□□ -0.35
LIMD2Q9BT23 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 FP325331.1-202ENST00000623531 1380 ntBASIC12.87□□□□□ -0.35
LIMD2Q9BT23 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 AL451085.2-201ENST00000605085 799 ntBASIC12.87□□□□□ -0.35
LIMD2Q9BT23 AC009086.3-201ENST00000623486 1008 ntBASIC12.87□□□□□ -0.35
LIMD2Q9BT23 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIMD2Q9BT23 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 LINC01529-204ENST00000636474 1715 ntBASIC12.86□□□□□ -0.35
LIMD2Q9BT23 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms