Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HIST1H2AAQ96QV6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2AAQ96QV6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.83■□□□□ 0.61
HIST1H2AAQ96QV6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2AAQ96QV6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2AAQ96QV6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HIST1H2AAQ96QV6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2AAQ96QV6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.83■□□□□ 0.61
HIST1H2AAQ96QV6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2AAQ96QV6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 AC099791.2-201ENST00000605725 427 ntBASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 AL499627.2-201ENST00000606283 725 ntBASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 AC127496.7-201ENST00000625110 1798 ntBASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2AAQ96QV6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 LINC01960-201ENST00000563759 1884 ntBASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 AC242852.2-201ENST00000615738 1807 ntBASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HIST1H2AAQ96QV6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 pRNA.6-201ENST00000610482 90 ntBASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 pRNA.5-201ENST00000612139 90 ntBASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 pRNA.11-201ENST00000618423 90 ntBASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 pRNA.13-201ENST00000619112 90 ntBASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HIST1H2AAQ96QV6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2AAQ96QV6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HIST1H2AAQ96QV6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.8■□□□□ 0.6
HIST1H2AAQ96QV6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2AAQ96QV6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2AAQ96QV6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.8■□□□□ 0.6
HIST1H2AAQ96QV6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HIST1H2AAQ96QV6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST1H2AAQ96QV6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2AAQ96QV6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 ECEL1P1-201ENST00000373592 1742 ntBASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2AAQ96QV6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 AC133637.1-201ENST00000624115 1537 ntBASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2AAQ96QV6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms