Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 AC007375.3-201ENST00000600936 2314 ntBASIC16.42■□□□□ 0.22
AP1S3Q96PC3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 LINC00526-201ENST00000581067 1875 ntBASIC16.42■□□□□ 0.22
AP1S3Q96PC3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S3Q96PC3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 AC092667.1-201ENST00000434301 2586 ntBASIC16.41■□□□□ 0.22
AP1S3Q96PC3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.41■□□□□ 0.22
AP1S3Q96PC3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S3Q96PC3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.39■□□□□ 0.22
AP1S3Q96PC3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 ALDH1A3-203ENST00000557963 1670 ntBASIC16.39■□□□□ 0.21
AP1S3Q96PC3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S3Q96PC3 ECEL1P1-201ENST00000373592 1742 ntBASIC16.39■□□□□ 0.21
AP1S3Q96PC3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 AC087393.1-201ENST00000582896 145 ntBASIC16.38■□□□□ 0.21
AP1S3Q96PC3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S3Q96PC3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms