Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.33■□□□□ 0.52
TIMD4Q96H15 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TIMD4Q96H15 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMD4Q96H15 LINC02228-203ENST00000641970 1355 ntBASIC18.32■□□□□ 0.52
TIMD4Q96H15 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMD4Q96H15 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.32■□□□□ 0.52
TIMD4Q96H15 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.32■□□□□ 0.52
TIMD4Q96H15 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TIMD4Q96H15 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.32■□□□□ 0.52
TIMD4Q96H15 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.32■□□□□ 0.52
TIMD4Q96H15 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.32■□□□□ 0.52
TIMD4Q96H15 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMD4Q96H15 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.31■□□□□ 0.52
TIMD4Q96H15 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TIMD4Q96H15 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMD4Q96H15 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TIMD4Q96H15 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.31■□□□□ 0.52
TIMD4Q96H15 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.31■□□□□ 0.52
TIMD4Q96H15 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.31■□□□□ 0.52
TIMD4Q96H15 AC093323.1-202ENST00000635031 2045 ntBASIC18.31■□□□□ 0.52
TIMD4Q96H15 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMD4Q96H15 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMD4Q96H15 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TIMD4Q96H15 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMD4Q96H15 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMD4Q96H15 OXCT2P1-201ENST00000447263 1535 ntBASIC18.3■□□□□ 0.52
TIMD4Q96H15 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMD4Q96H15 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TIMD4Q96H15 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMD4Q96H15 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
TIMD4Q96H15 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.3■□□□□ 0.52
TIMD4Q96H15 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMD4Q96H15 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMD4Q96H15 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMD4Q96H15 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMD4Q96H15 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.3■□□□□ 0.52
TIMD4Q96H15 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMD4Q96H15 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.29■□□□□ 0.52
TIMD4Q96H15 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TIMD4Q96H15 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.29■□□□□ 0.52
TIMD4Q96H15 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.29■□□□□ 0.52
TIMD4Q96H15 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.29■□□□□ 0.52
TIMD4Q96H15 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TIMD4Q96H15 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.29■□□□□ 0.52
TIMD4Q96H15 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMD4Q96H15 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMD4Q96H15 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.29■□□□□ 0.52
TIMD4Q96H15 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TIMD4Q96H15 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMD4Q96H15 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TIMD4Q96H15 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMD4Q96H15 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMD4Q96H15 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 AL162430.1-201ENST00000480705 870 ntBASIC18.28■□□□□ 0.52
TIMD4Q96H15 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMD4Q96H15 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMD4Q96H15 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.27■□□□□ 0.52
TIMD4Q96H15 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TIMD4Q96H15 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TIMD4Q96H15 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TIMD4Q96H15 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TIMD4Q96H15 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TIMD4Q96H15 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.27■□□□□ 0.52
TIMD4Q96H15 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.27■□□□□ 0.52
TIMD4Q96H15 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TIMD4Q96H15 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TIMD4Q96H15 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.27■□□□□ 0.52
TIMD4Q96H15 AC092666.2-201ENST00000613287 246 ntBASIC18.27■□□□□ 0.52
TIMD4Q96H15 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TIMD4Q96H15 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.27■□□□□ 0.52
TIMD4Q96H15 DUSP8P3-201ENST00000399571 1760 ntBASIC18.27■□□□□ 0.51
TIMD4Q96H15 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TIMD4Q96H15 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TIMD4Q96H15 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TIMD4Q96H15 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TIMD4Q96H15 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TIMD4Q96H15 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms