Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SIPA1Q96FS4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIPA1Q96FS4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.96■■□□□ 1.11
SIPA1Q96FS4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.96■■□□□ 1.11
SIPA1Q96FS4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SIPA1Q96FS4 AC006015.1-201ENST00000429970 570 ntBASIC21.96■■□□□ 1.11
SIPA1Q96FS4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.96■■□□□ 1.11
SIPA1Q96FS4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIPA1Q96FS4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIPA1Q96FS4 AC004854.2-201ENST00000608450 1441 ntBASIC21.96■■□□□ 1.11
SIPA1Q96FS4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIPA1Q96FS4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.95■■□□□ 1.1
SIPA1Q96FS4 ID1-201ENST00000376105 1233 ntBASIC21.95■■□□□ 1.1
SIPA1Q96FS4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.95■■□□□ 1.1
SIPA1Q96FS4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIPA1Q96FS4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIPA1Q96FS4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SIPA1Q96FS4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SIPA1Q96FS4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 AC080038.1-201ENST00000611274 1154 ntBASIC21.94■■□□□ 1.1
SIPA1Q96FS4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIPA1Q96FS4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SIPA1Q96FS4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIPA1Q96FS4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SIPA1Q96FS4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIPA1Q96FS4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIPA1Q96FS4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.92■■□□□ 1.1
SIPA1Q96FS4 KRT19P1-201ENST00000405746 1186 ntBASIC21.92■■□□□ 1.1
SIPA1Q96FS4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SIPA1Q96FS4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIPA1Q96FS4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.92■■□□□ 1.1
SIPA1Q96FS4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIPA1Q96FS4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.9■■□□□ 1.1
SIPA1Q96FS4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 AC079140.4-201ENST00000507448 529 ntBASIC21.9■■□□□ 1.1
SIPA1Q96FS4 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIPA1Q96FS4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SIPA1Q96FS4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SIPA1Q96FS4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SIPA1Q96FS4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SIPA1Q96FS4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIPA1Q96FS4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.89■■□□□ 1.09
SIPA1Q96FS4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.89■■□□□ 1.09
SIPA1Q96FS4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SIPA1Q96FS4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms