Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS1Q92902 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.76■□□□□ 0.75
HPS1Q92902 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS1Q92902 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HPS1Q92902 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS1Q92902 FBXW4P1-201ENST00000426721 2239 ntBASIC19.75■□□□□ 0.75
HPS1Q92902 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS1Q92902 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HPS1Q92902 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HPS1Q92902 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.75■□□□□ 0.75
HPS1Q92902 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.75■□□□□ 0.75
HPS1Q92902 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.75■□□□□ 0.75
HPS1Q92902 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS1Q92902 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS1Q92902 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HPS1Q92902 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS1Q92902 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS1Q92902 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS1Q92902 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HPS1Q92902 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.74■□□□□ 0.75
HPS1Q92902 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.74■□□□□ 0.75
HPS1Q92902 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPS1Q92902 MIR6089-201ENST00000616698 64 ntBASIC19.74■□□□□ 0.75
HPS1Q92902 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.74■□□□□ 0.75
HPS1Q92902 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HPS1Q92902 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS1Q92902 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.73■□□□□ 0.75
HPS1Q92902 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HPS1Q92902 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS1Q92902 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS1Q92902 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HPS1Q92902 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.73■□□□□ 0.75
HPS1Q92902 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.73■□□□□ 0.75
HPS1Q92902 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.73■□□□□ 0.75
HPS1Q92902 AC092028.1-203ENST00000608262 953 ntBASIC19.73■□□□□ 0.75
HPS1Q92902 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.73■□□□□ 0.75
HPS1Q92902 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HPS1Q92902 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HPS1Q92902 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS1Q92902 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS1Q92902 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.73■□□□□ 0.75
HPS1Q92902 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS1Q92902 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HPS1Q92902 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS1Q92902 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS1Q92902 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS1Q92902 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS1Q92902 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.72■□□□□ 0.75
HPS1Q92902 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.72■□□□□ 0.75
HPS1Q92902 MIR4281-201ENST00000580852 62 ntBASIC19.72■□□□□ 0.75
HPS1Q92902 AC026310.3-201ENST00000625186 2373 ntBASIC19.72■□□□□ 0.75
HPS1Q92902 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS1Q92902 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS1Q92902 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS1Q92902 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
HPS1Q92902 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HPS1Q92902 ANOS2P-203ENST00000472227 1816 ntBASIC19.72■□□□□ 0.75
HPS1Q92902 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS1Q92902 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS1Q92902 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.71■□□□□ 0.75
HPS1Q92902 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS1Q92902 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HPS1Q92902 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS1Q92902 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.71■□□□□ 0.75
HPS1Q92902 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS1Q92902 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS1Q92902 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HPS1Q92902 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HPS1Q92902 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HPS1Q92902 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS1Q92902 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HPS1Q92902 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS1Q92902 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS1Q92902 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPS1Q92902 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.7■□□□□ 0.74
HPS1Q92902 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.7■□□□□ 0.74
HPS1Q92902 TSPY9P-201ENST00000440215 945 ntBASIC19.7■□□□□ 0.74
HPS1Q92902 TSPY11P-201ENST00000442607 1045 ntBASIC19.7■□□□□ 0.74
HPS1Q92902 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HPS1Q92902 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS1Q92902 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.7■□□□□ 0.74
HPS1Q92902 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.7■□□□□ 0.74
HPS1Q92902 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS1Q92902 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HPS1Q92902 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS1Q92902 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.69■□□□□ 0.74
HPS1Q92902 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS1Q92902 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.69■□□□□ 0.74
HPS1Q92902 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.69■□□□□ 0.74
HPS1Q92902 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.69■□□□□ 0.74
HPS1Q92902 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HPS1Q92902 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS1Q92902 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS1Q92902 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS1Q92902 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS1Q92902 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS1Q92902 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HPS1Q92902 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS1Q92902 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS1Q92902 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms