Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 AC087742.1-201ENST00000575880 1738 ntBASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4IP1Q8WWV3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 UNC93B8-201ENST00000511903 705 ntBASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RTN4IP1Q8WWV3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RTN4IP1Q8WWV3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 GUSBP5-201ENST00000418136 578 ntBASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN4IP1Q8WWV3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4IP1Q8WWV3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4IP1Q8WWV3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4IP1Q8WWV3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RTN4IP1Q8WWV3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4IP1Q8WWV3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RTN4IP1Q8WWV3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4IP1Q8WWV3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 KRT16P3-201ENST00000439127 1283 ntBASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4IP1Q8WWV3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 AC026310.3-201ENST00000625186 2373 ntBASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms