Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 AL136162.1-201ENST00000607711 1078 ntBASIC21.56■■□□□ 1.04
SKA2Q8WVK7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SKA2Q8WVK7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 AC011298.3-201ENST00000615796 283 ntBASIC21.55■■□□□ 1.04
SKA2Q8WVK7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SKA2Q8WVK7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SKA2Q8WVK7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.54■■□□□ 1.04
SKA2Q8WVK7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SKA2Q8WVK7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SKA2Q8WVK7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SKA2Q8WVK7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.54■■□□□ 1.04
SKA2Q8WVK7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SKA2Q8WVK7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SKA2Q8WVK7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SKA2Q8WVK7 AC135279.3-201ENST00000610945 1311 ntBASIC21.54■■□□□ 1.04
SKA2Q8WVK7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 AC136469.2-201ENST00000623944 1028 ntBASIC21.53■■□□□ 1.04
SKA2Q8WVK7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SKA2Q8WVK7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 PBX2P1-201ENST00000493219 1291 ntBASIC21.52■■□□□ 1.04
SKA2Q8WVK7 AC024257.2-201ENST00000549699 147 ntBASIC21.52■■□□□ 1.04
SKA2Q8WVK7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SKA2Q8WVK7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.51■■□□□ 1.03
SKA2Q8WVK7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 MIR4767-201ENST00000582827 78 ntBASIC21.5■■□□□ 1.03
SKA2Q8WVK7 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.5■■□□□ 1.03
SKA2Q8WVK7 ESRRAP2-201ENST00000418437 1549 ntBASIC21.5■■□□□ 1.03
SKA2Q8WVK7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.49■■□□□ 1.03
SKA2Q8WVK7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SKA2Q8WVK7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.49■■□□□ 1.03
SKA2Q8WVK7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SKA2Q8WVK7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms