Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DYNC2LI1Q8TCX1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
DYNC2LI1Q8TCX1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.34■□□□□ 0.69
DYNC2LI1Q8TCX1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
DYNC2LI1Q8TCX1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DYNC2LI1Q8TCX1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.34■□□□□ 0.69
DYNC2LI1Q8TCX1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.34■□□□□ 0.69
DYNC2LI1Q8TCX1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DYNC2LI1Q8TCX1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
DYNC2LI1Q8TCX1 AC144652.1-201ENST00000609974 1624 ntBASIC19.33■□□□□ 0.69
DYNC2LI1Q8TCX1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.33■□□□□ 0.69
DYNC2LI1Q8TCX1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DYNC2LI1Q8TCX1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
DYNC2LI1Q8TCX1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
DYNC2LI1Q8TCX1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DYNC2LI1Q8TCX1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DYNC2LI1Q8TCX1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 AC092296.2-201ENST00000589470 999 ntBASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DYNC2LI1Q8TCX1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DYNC2LI1Q8TCX1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DYNC2LI1Q8TCX1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 AC026202.3-201ENST00000600805 1127 ntBASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 RAP2CP1-202ENST00000605179 643 ntBASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
DYNC2LI1Q8TCX1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
DYNC2LI1Q8TCX1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.27■□□□□ 0.68
DYNC2LI1Q8TCX1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
DYNC2LI1Q8TCX1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DYNC2LI1Q8TCX1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DYNC2LI1Q8TCX1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DYNC2LI1Q8TCX1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DYNC2LI1Q8TCX1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DYNC2LI1Q8TCX1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms