Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 H19-210ENST00000439725 1929 ntTSL 2 BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHKBP1Q8TBC3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SHKBP1Q8TBC3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.99■■□□□ 1.27
SHKBP1Q8TBC3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SHKBP1Q8TBC3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.99■■□□□ 1.27
SHKBP1Q8TBC3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHKBP1Q8TBC3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
SHKBP1Q8TBC3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SHKBP1Q8TBC3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.99■■□□□ 1.27
SHKBP1Q8TBC3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 TPRG1LP1-201ENST00000598702 760 ntBASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.98■■□□□ 1.27
SHKBP1Q8TBC3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 KRT18P61-201ENST00000585825 1298 ntBASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHKBP1Q8TBC3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.96■■□□□ 1.27
SHKBP1Q8TBC3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
SHKBP1Q8TBC3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SHKBP1Q8TBC3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SHKBP1Q8TBC3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.95■■□□□ 1.26
SHKBP1Q8TBC3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.95■■□□□ 1.26
SHKBP1Q8TBC3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
SHKBP1Q8TBC3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 AC068587.7-201ENST00000641602 218 ntBASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHKBP1Q8TBC3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.93■■□□□ 1.26
SHKBP1Q8TBC3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms