Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 FAM99A-202ENST00000538190 1989 ntBASIC21.3■■□□□ 1
CPSF7Q8N684 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.29■■□□□ 1
CPSF7Q8N684 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CPSF7Q8N684 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.29■■□□□ 1
CPSF7Q8N684 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.29■■□□□ 1
CPSF7Q8N684 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF7Q8N684 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.29■■□□□ 1
CPSF7Q8N684 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.28■■□□□ 1
CPSF7Q8N684 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.28■■□□□ 1
CPSF7Q8N684 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CPSF7Q8N684 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF7Q8N684 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.28■■□□□ 1
CPSF7Q8N684 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF7Q8N684 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.28■■□□□ 1
CPSF7Q8N684 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.28■■□□□ 1
CPSF7Q8N684 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.28■■□□□ 1
CPSF7Q8N684 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.28■■□□□ 1
CPSF7Q8N684 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.28■■□□□ 1
CPSF7Q8N684 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.28■■□□□ 1
CPSF7Q8N684 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF7Q8N684 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF7Q8N684 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF7Q8N684 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.27■■□□□ 1
CPSF7Q8N684 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CPSF7Q8N684 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CPSF7Q8N684 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.27■■□□□ 1
CPSF7Q8N684 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.27■■□□□ 1
CPSF7Q8N684 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.27■■□□□ 1
CPSF7Q8N684 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.27■■□□□ 1
CPSF7Q8N684 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.27■■□□□ 1
CPSF7Q8N684 MIR6724-1-201ENST00000616420 92 ntBASIC21.27■■□□□ 1
CPSF7Q8N684 MIR6724-2-201ENST00000616483 92 ntBASIC21.27■■□□□ 1
CPSF7Q8N684 MIR6724-4-201ENST00000617390 92 ntBASIC21.27■■□□□ 1
CPSF7Q8N684 MIR6724-3-201ENST00000622482 92 ntBASIC21.27■■□□□ 1
CPSF7Q8N684 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.27■■□□□ 1
CPSF7Q8N684 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.27■■□□□ 1
CPSF7Q8N684 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CPSF7Q8N684 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CPSF7Q8N684 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CPSF7Q8N684 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.27■■□□□ 1
CPSF7Q8N684 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.26■□□□□ 0.99
CPSF7Q8N684 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF7Q8N684 AL117332.1-201ENST00000622628 974 ntBASIC21.26■□□□□ 0.99
CPSF7Q8N684 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.26■□□□□ 0.99
CPSF7Q8N684 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.26■□□□□ 0.99
CPSF7Q8N684 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF7Q8N684 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CPSF7Q8N684 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF7Q8N684 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF7Q8N684 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPSF7Q8N684 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPSF7Q8N684 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPSF7Q8N684 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.25■□□□□ 0.99
CPSF7Q8N684 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.25■□□□□ 0.99
CPSF7Q8N684 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPSF7Q8N684 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CPSF7Q8N684 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.25■□□□□ 0.99
CPSF7Q8N684 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF7Q8N684 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF7Q8N684 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF7Q8N684 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.24■□□□□ 0.99
CPSF7Q8N684 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF7Q8N684 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
CPSF7Q8N684 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF7Q8N684 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.24■□□□□ 0.99
CPSF7Q8N684 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.24■□□□□ 0.99
CPSF7Q8N684 AC131281.2-201ENST00000520478 145 ntBASIC21.24■□□□□ 0.99
CPSF7Q8N684 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF7Q8N684 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF7Q8N684 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.24■□□□□ 0.99
CPSF7Q8N684 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CPSF7Q8N684 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF7Q8N684 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF7Q8N684 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF7Q8N684 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CPSF7Q8N684 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF7Q8N684 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF7Q8N684 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.23■□□□□ 0.99
CPSF7Q8N684 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF7Q8N684 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF7Q8N684 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF7Q8N684 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF7Q8N684 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF7Q8N684 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.22■□□□□ 0.99
CPSF7Q8N684 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF7Q8N684 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF7Q8N684 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF7Q8N684 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF7Q8N684 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF7Q8N684 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF7Q8N684 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms