Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 SMG8-203ENST00000578922 2178 ntBASIC16.4■□□□□ 0.22
HIST3H2BBQ8N257 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.39■□□□□ 0.22
HIST3H2BBQ8N257 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2BBQ8N257 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2BBQ8N257 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 Z98882.1-201ENST00000622160 2253 ntBASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2BBQ8N257 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST3H2BBQ8N257 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms