Protein–RNA interactions for Protein: Q8IXM3

MRPL41, 39S ribosomal protein L41, mitochondrial, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL41Q8IXM3 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 MIR638-201ENST00000385237 100 ntBASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 EP400NL-214ENST00000641289 2402 ntBASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL41Q8IXM3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
MRPL41Q8IXM3 ESRRAP2-201ENST00000418437 1549 ntBASIC17.83■□□□□ 0.45
MRPL41Q8IXM3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
MRPL41Q8IXM3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 MIR4466-201ENST00000606121 54 ntBASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.83■□□□□ 0.44
MRPL41Q8IXM3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPL41Q8IXM3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 AC233723.2-201ENST00000623798 2106 ntBASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 MIR6722-201ENST00000617286 78 ntBASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL41Q8IXM3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 AC079630.1-202ENST00000618127 1840 ntBASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 AL512631.2-201ENST00000604634 923 ntBASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MRPL41Q8IXM3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL41Q8IXM3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRPL41Q8IXM3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRPL41Q8IXM3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
MRPL41Q8IXM3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRPL41Q8IXM3 AC096631.2-201ENST00000436136 790 ntBASIC17.78■□□□□ 0.44
MRPL41Q8IXM3 AC110285.6-201ENST00000617652 491 ntBASIC17.78■□□□□ 0.44
MRPL41Q8IXM3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.78■□□□□ 0.44
MRPL41Q8IXM3 AC138932.1-201ENST00000534164 6830 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms