Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 AC004854.2-201ENST00000608450 1441 ntBASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 AC087239.1-201ENST00000622671 572 ntBASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 AC092068.2-201ENST00000590491 1708 ntBASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RAI1Q7Z5J4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RAI1Q7Z5J4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.77■□□□□ 0.59
RAI1Q7Z5J4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAI1Q7Z5J4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
RAI1Q7Z5J4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 CDCA4P2-201ENST00000441182 718 ntBASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 BX005040.4-201ENST00000637145 1518 ntBASIC18.76■□□□□ 0.59
RAI1Q7Z5J4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.75■□□□□ 0.59
RAI1Q7Z5J4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 AC026185.1-201ENST00000445748 174 ntBASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 SMUG1P1-201ENST00000590640 811 ntBASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.74■□□□□ 0.59
RAI1Q7Z5J4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 ANOS2P-203ENST00000472227 1816 ntBASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAI1Q7Z5J4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.72■□□□□ 0.59
RAI1Q7Z5J4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms