Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
SCXQ7RTU7 LINC00565-201ENST00000562710 2331 ntBASIC14.29□□□□□ -0.12
SCXQ7RTU7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
SCXQ7RTU7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SCXQ7RTU7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.29□□□□□ -0.12
SCXQ7RTU7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.29□□□□□ -0.12
SCXQ7RTU7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.29□□□□□ -0.12
SCXQ7RTU7 AC092666.2-201ENST00000613287 246 ntBASIC14.29□□□□□ -0.12
SCXQ7RTU7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SCXQ7RTU7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCXQ7RTU7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SCXQ7RTU7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC14.28□□□□□ -0.12
SCXQ7RTU7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.28□□□□□ -0.12
SCXQ7RTU7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14.28□□□□□ -0.12
SCXQ7RTU7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SCXQ7RTU7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.28□□□□□ -0.12
SCXQ7RTU7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SCXQ7RTU7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCXQ7RTU7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SCXQ7RTU7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCXQ7RTU7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SCXQ7RTU7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC14.27□□□□□ -0.12
SCXQ7RTU7 AL117328.2-201ENST00000624617 1940 ntBASIC14.27□□□□□ -0.12
SCXQ7RTU7 AP003733.4-201ENST00000623785 1697 ntBASIC14.27□□□□□ -0.12
SCXQ7RTU7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCXQ7RTU7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC14.27□□□□□ -0.12
SCXQ7RTU7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCXQ7RTU7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SCXQ7RTU7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SCXQ7RTU7 AC233992.3-201ENST00000607491 485 ntBASIC14.27□□□□□ -0.13
SCXQ7RTU7 pRNA.6-201ENST00000610482 90 ntBASIC14.27□□□□□ -0.13
SCXQ7RTU7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SCXQ7RTU7 pRNA.5-201ENST00000612139 90 ntBASIC14.27□□□□□ -0.13
SCXQ7RTU7 pRNA.11-201ENST00000618423 90 ntBASIC14.27□□□□□ -0.13
SCXQ7RTU7 pRNA.13-201ENST00000619112 90 ntBASIC14.27□□□□□ -0.13
SCXQ7RTU7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SCXQ7RTU7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCXQ7RTU7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SCXQ7RTU7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
SCXQ7RTU7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCXQ7RTU7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.27□□□□□ -0.13
SCXQ7RTU7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SCXQ7RTU7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCXQ7RTU7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCXQ7RTU7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCXQ7RTU7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCXQ7RTU7 IRS3P-201ENST00000223076 1006 ntBASIC14.26□□□□□ -0.13
SCXQ7RTU7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCXQ7RTU7 BX842568.3-201ENST00000418104 571 ntBASIC14.26□□□□□ -0.13
SCXQ7RTU7 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.26□□□□□ -0.13
SCXQ7RTU7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCXQ7RTU7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.26□□□□□ -0.13
SCXQ7RTU7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCXQ7RTU7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCXQ7RTU7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
SCXQ7RTU7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCXQ7RTU7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCXQ7RTU7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.25□□□□□ -0.13
SCXQ7RTU7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SCXQ7RTU7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCXQ7RTU7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCXQ7RTU7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCXQ7RTU7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCXQ7RTU7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCXQ7RTU7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCXQ7RTU7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCXQ7RTU7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.25□□□□□ -0.13
SCXQ7RTU7 AC104564.3-201ENST00000582367 638 ntBASIC14.25□□□□□ -0.13
SCXQ7RTU7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SCXQ7RTU7 MIR6821-201ENST00000617625 74 ntBASIC14.25□□□□□ -0.13
SCXQ7RTU7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms