Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM53Q6P2H8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM53Q6P2H8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM53Q6P2H8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM53Q6P2H8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 GUSBP5-202ENST00000510805 1989 ntBASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM53Q6P2H8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 AL356441.2-201ENST00000443009 864 ntBASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM53Q6P2H8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
TMEM53Q6P2H8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.77■□□□□ 0.75
TMEM53Q6P2H8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TMEM53Q6P2H8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 ECEL1P1-201ENST00000373592 1742 ntBASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM53Q6P2H8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms