Protein–RNA interactions for Protein: Q5PRF9

SAMD4B, Protein Smaug homolog 2, humanhuman

Known RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4BQ5PRF9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4BQ5PRF9 KRT18P24-201ENST00000344739 1156 ntBASIC20.74■□□□□ 0.91
SAMD4BQ5PRF9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4BQ5PRF9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
SAMD4BQ5PRF9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.74■□□□□ 0.91
SAMD4BQ5PRF9 AC139795.1-202ENST00000500444 432 ntBASIC20.74■□□□□ 0.91
SAMD4BQ5PRF9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4BQ5PRF9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4BQ5PRF9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4BQ5PRF9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.72■□□□□ 0.91
SAMD4BQ5PRF9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 AC009086.3-201ENST00000623486 1008 ntBASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SAMD4BQ5PRF9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.7■□□□□ 0.91
SAMD4BQ5PRF9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 U85056.1-201ENST00000616429 682 ntBASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.7■□□□□ 0.9
SAMD4BQ5PRF9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4BQ5PRF9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 CA15P2-201ENST00000611168 834 ntBASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4BQ5PRF9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4BQ5PRF9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4BQ5PRF9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4BQ5PRF9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4BQ5PRF9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4BQ5PRF9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms