Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.14■□□□□ 0.65
NKX6-1P78426 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.14■□□□□ 0.65
NKX6-1P78426 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.14■□□□□ 0.65
NKX6-1P78426 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.14■□□□□ 0.65
NKX6-1P78426 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.14■□□□□ 0.65
NKX6-1P78426 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.14■□□□□ 0.65
NKX6-1P78426 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-1P78426 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-1P78426 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NKX6-1P78426 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NKX6-1P78426 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-1P78426 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-1P78426 AL353803.4-201ENST00000565882 1934 ntBASIC19.13■□□□□ 0.65
NKX6-1P78426 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NKX6-1P78426 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX6-1P78426 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
NKX6-1P78426 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.13■□□□□ 0.65
NKX6-1P78426 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.13■□□□□ 0.65
NKX6-1P78426 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NKX6-1P78426 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.13■□□□□ 0.65
NKX6-1P78426 AC123595.1-201ENST00000440769 1046 ntBASIC19.13■□□□□ 0.65
NKX6-1P78426 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NKX6-1P78426 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
NKX6-1P78426 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NKX6-1P78426 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX6-1P78426 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.13■□□□□ 0.65
NKX6-1P78426 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX6-1P78426 ANOS2P-203ENST00000472227 1816 ntBASIC19.13■□□□□ 0.65
NKX6-1P78426 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX6-1P78426 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX6-1P78426 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-1P78426 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-1P78426 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-1P78426 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX6-1P78426 AC092068.2-201ENST00000590491 1708 ntBASIC19.12■□□□□ 0.65
NKX6-1P78426 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-1P78426 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.12■□□□□ 0.65
NKX6-1P78426 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-1P78426 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.12■□□□□ 0.65
NKX6-1P78426 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX6-1P78426 AC027612.3-201ENST00000413684 1047 ntBASIC19.12■□□□□ 0.65
NKX6-1P78426 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-1P78426 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-1P78426 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-1P78426 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-1P78426 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-1P78426 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NKX6-1P78426 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-1P78426 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.11■□□□□ 0.65
NKX6-1P78426 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.11■□□□□ 0.65
NKX6-1P78426 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-1P78426 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-1P78426 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-1P78426 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.11■□□□□ 0.65
NKX6-1P78426 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NKX6-1P78426 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.11■□□□□ 0.65
NKX6-1P78426 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.11■□□□□ 0.65
NKX6-1P78426 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.11■□□□□ 0.65
NKX6-1P78426 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-1P78426 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-1P78426 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-1P78426 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NKX6-1P78426 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX6-1P78426 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX6-1P78426 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-1P78426 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NKX6-1P78426 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-1P78426 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-1P78426 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NKX6-1P78426 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX6-1P78426 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NKX6-1P78426 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.09■□□□□ 0.65
NKX6-1P78426 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX6-1P78426 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NKX6-1P78426 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NKX6-1P78426 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
NKX6-1P78426 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-1P78426 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NKX6-1P78426 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NKX6-1P78426 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NKX6-1P78426 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NKX6-1P78426 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NKX6-1P78426 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
NKX6-1P78426 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NKX6-1P78426 OR2I1P-207ENST00000453522 948 ntBASIC19.08■□□□□ 0.64
NKX6-1P78426 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.08■□□□□ 0.64
NKX6-1P78426 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.08■□□□□ 0.64
NKX6-1P78426 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.08■□□□□ 0.64
NKX6-1P78426 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
NKX6-1P78426 MIR6084-201ENST00000622012 110 ntBASIC19.08■□□□□ 0.64
NKX6-1P78426 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms