Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.34■■□□□ 1.01
YBX1P67809 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.34■■□□□ 1.01
YBX1P67809 MIR4767-201ENST00000582827 78 ntBASIC21.34■■□□□ 1.01
YBX1P67809 AC106739.1-201ENST00000617035 715 ntBASIC21.34■■□□□ 1.01
YBX1P67809 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.34■■□□□ 1.01
YBX1P67809 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
YBX1P67809 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.34■■□□□ 1.01
YBX1P67809 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.34■■□□□ 1.01
YBX1P67809 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
YBX1P67809 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
YBX1P67809 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
YBX1P67809 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
YBX1P67809 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
YBX1P67809 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
YBX1P67809 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
YBX1P67809 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.33■■□□□ 1.01
YBX1P67809 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
YBX1P67809 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.33■■□□□ 1
YBX1P67809 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
YBX1P67809 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
YBX1P67809 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
YBX1P67809 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.32■■□□□ 1
YBX1P67809 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
YBX1P67809 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.32■■□□□ 1
YBX1P67809 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
YBX1P67809 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.32■■□□□ 1
YBX1P67809 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.32■■□□□ 1
YBX1P67809 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
YBX1P67809 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.32■■□□□ 1
YBX1P67809 AC011298.3-201ENST00000615796 283 ntBASIC21.32■■□□□ 1
YBX1P67809 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.32■■□□□ 1
YBX1P67809 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.32■■□□□ 1
YBX1P67809 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.32■■□□□ 1
YBX1P67809 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
YBX1P67809 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
YBX1P67809 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.32■■□□□ 1
YBX1P67809 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
YBX1P67809 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YBX1P67809 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YBX1P67809 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.31■■□□□ 1
YBX1P67809 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.31■■□□□ 1
YBX1P67809 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.31■■□□□ 1
YBX1P67809 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YBX1P67809 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.31■■□□□ 1
YBX1P67809 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YBX1P67809 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.31■■□□□ 1
YBX1P67809 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
YBX1P67809 AC010525.1-201ENST00000585559 441 ntBASIC21.31■■□□□ 1
YBX1P67809 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.31■■□□□ 1
YBX1P67809 AL138724.1-201ENST00000606771 1088 ntBASIC21.31■■□□□ 1
YBX1P67809 AL031432.3-201ENST00000607698 485 ntBASIC21.31■■□□□ 1
YBX1P67809 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.31■■□□□ 1
YBX1P67809 AC136469.2-201ENST00000623944 1028 ntBASIC21.31■■□□□ 1
YBX1P67809 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
YBX1P67809 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
YBX1P67809 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.3■■□□□ 1
YBX1P67809 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.3■■□□□ 1
YBX1P67809 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.3■■□□□ 1
YBX1P67809 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.3■■□□□ 1
YBX1P67809 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.3■■□□□ 1
YBX1P67809 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
YBX1P67809 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YBX1P67809 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
YBX1P67809 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
YBX1P67809 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.3■■□□□ 1
YBX1P67809 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.29■■□□□ 1
YBX1P67809 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YBX1P67809 AL137060.1-201ENST00000618151 2648 ntBASIC21.29■■□□□ 1
YBX1P67809 AC127496.7-201ENST00000625110 1798 ntBASIC21.29■■□□□ 1
YBX1P67809 MIR638-201ENST00000385237 100 ntBASIC21.29■■□□□ 1
YBX1P67809 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.29■■□□□ 1
YBX1P67809 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.29■■□□□ 1
YBX1P67809 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
YBX1P67809 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
YBX1P67809 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YBX1P67809 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YBX1P67809 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.29■■□□□ 1
YBX1P67809 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
YBX1P67809 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
YBX1P67809 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
YBX1P67809 AC137767.1-201ENST00000602918 1920 ntBASIC21.28■■□□□ 1
YBX1P67809 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
YBX1P67809 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
YBX1P67809 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
YBX1P67809 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
YBX1P67809 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
YBX1P67809 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.28■■□□□ 1
YBX1P67809 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
YBX1P67809 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
YBX1P67809 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
YBX1P67809 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
YBX1P67809 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
YBX1P67809 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.27■■□□□ 1
YBX1P67809 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
YBX1P67809 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
YBX1P67809 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.27■■□□□ 1
YBX1P67809 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.27■■□□□ 1
YBX1P67809 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.27■■□□□ 1
YBX1P67809 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.27■■□□□ 1
YBX1P67809 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms