Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RAB5BP61020 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB5BP61020 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RAB5BP61020 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB5BP61020 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 LINC00273-201ENST00000539813 1452 ntBASIC17.15■□□□□ 0.34
RAB5BP61020 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB5BP61020 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB5BP61020 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB5BP61020 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RAB5BP61020 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RAB5BP61020 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB5BP61020 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5BP61020 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB5BP61020 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RAB5BP61020 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5BP61020 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5BP61020 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RAB5BP61020 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB5BP61020 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5BP61020 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RAB5BP61020 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5BP61020 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5BP61020 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB5BP61020 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB5BP61020 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB5BP61020 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5BP61020 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5BP61020 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5BP61020 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB5BP61020 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB5BP61020 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB5BP61020 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RAB5BP61020 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAB5BP61020 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5BP61020 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB5BP61020 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB5BP61020 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB5BP61020 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
RAB5BP61020 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB5BP61020 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB5BP61020 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB5BP61020 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB5BP61020 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB5BP61020 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
RAB5BP61020 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5BP61020 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB5BP61020 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RAB5BP61020 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB5BP61020 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB5BP61020 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB5BP61020 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB5BP61020 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAB5BP61020 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB5BP61020 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms