Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PSMD4P55036 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.27■□□□□ 0.84
PSMD4P55036 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.27■□□□□ 0.84
PSMD4P55036 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD4P55036 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PSMD4P55036 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD4P55036 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD4P55036 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD4P55036 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD4P55036 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD4P55036 AL136162.1-201ENST00000607711 1078 ntBASIC20.27■□□□□ 0.84
PSMD4P55036 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.27■□□□□ 0.84
PSMD4P55036 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PSMD4P55036 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PSMD4P55036 AC135279.3-201ENST00000610945 1311 ntBASIC20.27■□□□□ 0.83
PSMD4P55036 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PSMD4P55036 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PSMD4P55036 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD4P55036 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD4P55036 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD4P55036 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.26■□□□□ 0.83
PSMD4P55036 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD4P55036 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PSMD4P55036 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PSMD4P55036 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.26■□□□□ 0.83
PSMD4P55036 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PSMD4P55036 AC096631.2-201ENST00000436136 790 ntBASIC20.26■□□□□ 0.83
PSMD4P55036 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD4P55036 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PSMD4P55036 GUSBP5-202ENST00000510805 1989 ntBASIC20.26■□□□□ 0.83
PSMD4P55036 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PSMD4P55036 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PSMD4P55036 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD4P55036 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.26■□□□□ 0.83
PSMD4P55036 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.25■□□□□ 0.83
PSMD4P55036 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD4P55036 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.25■□□□□ 0.83
PSMD4P55036 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.25■□□□□ 0.83
PSMD4P55036 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD4P55036 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PSMD4P55036 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD4P55036 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.25■□□□□ 0.83
PSMD4P55036 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD4P55036 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD4P55036 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.25■□□□□ 0.83
PSMD4P55036 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD4P55036 AC079834.2-201ENST00000609776 1949 ntBASIC20.25■□□□□ 0.83
PSMD4P55036 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.25■□□□□ 0.83
PSMD4P55036 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.24■□□□□ 0.83
PSMD4P55036 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PSMD4P55036 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD4P55036 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.24■□□□□ 0.83
PSMD4P55036 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PSMD4P55036 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD4P55036 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD4P55036 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD4P55036 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.24■□□□□ 0.83
PSMD4P55036 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.24■□□□□ 0.83
PSMD4P55036 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD4P55036 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD4P55036 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD4P55036 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PSMD4P55036 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD4P55036 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD4P55036 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD4P55036 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PSMD4P55036 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD4P55036 AC242852.2-201ENST00000615738 1807 ntBASIC20.23■□□□□ 0.83
PSMD4P55036 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD4P55036 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD4P55036 ECEL1P1-201ENST00000373592 1742 ntBASIC20.23■□□□□ 0.83
PSMD4P55036 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PSMD4P55036 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.23■□□□□ 0.83
PSMD4P55036 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.23■□□□□ 0.83
PSMD4P55036 AC024257.2-201ENST00000549699 147 ntBASIC20.23■□□□□ 0.83
PSMD4P55036 AC087742.1-201ENST00000575880 1738 ntBASIC20.23■□□□□ 0.83
PSMD4P55036 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.23■□□□□ 0.83
PSMD4P55036 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.23■□□□□ 0.83
PSMD4P55036 AC087239.1-201ENST00000622671 572 ntBASIC20.23■□□□□ 0.83
PSMD4P55036 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD4P55036 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD4P55036 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD4P55036 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.22■□□□□ 0.83
PSMD4P55036 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD4P55036 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD4P55036 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.22■□□□□ 0.83
PSMD4P55036 PBX2P1-201ENST00000493219 1291 ntBASIC20.22■□□□□ 0.83
PSMD4P55036 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.22■□□□□ 0.83
PSMD4P55036 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.22■□□□□ 0.83
PSMD4P55036 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.22■□□□□ 0.83
PSMD4P55036 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.22■□□□□ 0.83
PSMD4P55036 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD4P55036 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD4P55036 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD4P55036 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PSMD4P55036 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PSMD4P55036 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD4P55036 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PSMD4P55036 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD4P55036 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms