Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 AL136116.3-201ENST00000402907 1138 ntBASIC19.65■□□□□ 0.74
NR4A2P43354 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR4A2P43354 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.65■□□□□ 0.74
NR4A2P43354 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.65■□□□□ 0.74
NR4A2P43354 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.65■□□□□ 0.74
NR4A2P43354 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NR4A2P43354 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NR4A2P43354 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.65■□□□□ 0.74
NR4A2P43354 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NR4A2P43354 AF131216.4-201ENST00000638924 1588 ntBASIC19.65■□□□□ 0.74
NR4A2P43354 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR4A2P43354 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NR4A2P43354 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.64■□□□□ 0.74
NR4A2P43354 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NR4A2P43354 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR4A2P43354 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR4A2P43354 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR4A2P43354 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR4A2P43354 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR4A2P43354 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NR4A2P43354 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR4A2P43354 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR4A2P43354 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NR4A2P43354 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.63■□□□□ 0.73
NR4A2P43354 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.63■□□□□ 0.73
NR4A2P43354 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.63■□□□□ 0.73
NR4A2P43354 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.63■□□□□ 0.73
NR4A2P43354 AL139246.5-201ENST00000606645 996 ntBASIC19.63■□□□□ 0.73
NR4A2P43354 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.63■□□□□ 0.73
NR4A2P43354 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.63■□□□□ 0.73
NR4A2P43354 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.63■□□□□ 0.73
NR4A2P43354 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR4A2P43354 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
NR4A2P43354 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NR4A2P43354 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR4A2P43354 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.62■□□□□ 0.73
NR4A2P43354 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR4A2P43354 AL161729.1-201ENST00000604104 1402 ntBASIC19.62■□□□□ 0.73
NR4A2P43354 MIR638-201ENST00000385237 100 ntBASIC19.62■□□□□ 0.73
NR4A2P43354 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NR4A2P43354 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.62■□□□□ 0.73
NR4A2P43354 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.62■□□□□ 0.73
NR4A2P43354 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.62■□□□□ 0.73
NR4A2P43354 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NR4A2P43354 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR4A2P43354 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NR4A2P43354 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NR4A2P43354 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NR4A2P43354 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NR4A2P43354 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR4A2P43354 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NR4A2P43354 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A2P43354 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.61■□□□□ 0.73
NR4A2P43354 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.61■□□□□ 0.73
NR4A2P43354 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.61■□□□□ 0.73
NR4A2P43354 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.61■□□□□ 0.73
NR4A2P43354 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.61■□□□□ 0.73
NR4A2P43354 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A2P43354 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
NR4A2P43354 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A2P43354 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NR4A2P43354 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A2P43354 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A2P43354 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A2P43354 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.61■□□□□ 0.73
NR4A2P43354 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.61■□□□□ 0.73
NR4A2P43354 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
NR4A2P43354 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.6■□□□□ 0.73
NR4A2P43354 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A2P43354 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A2P43354 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.6■□□□□ 0.73
NR4A2P43354 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NR4A2P43354 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A2P43354 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A2P43354 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NR4A2P43354 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.6■□□□□ 0.73
NR4A2P43354 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.6■□□□□ 0.73
NR4A2P43354 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.6■□□□□ 0.73
NR4A2P43354 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NR4A2P43354 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NR4A2P43354 AC007952.6-201ENST00000573168 2673 ntBASIC19.6■□□□□ 0.73
NR4A2P43354 AC003957.1-201ENST00000625108 2673 ntBASIC19.6■□□□□ 0.73
NR4A2P43354 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A2P43354 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A2P43354 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A2P43354 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NR4A2P43354 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A2P43354 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A2P43354 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.59■□□□□ 0.73
NR4A2P43354 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms