Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CEACAM3P40198 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CEACAM3P40198 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CEACAM3P40198 AC008764.7-201ENST00000593779 1081 ntBASIC17.76■□□□□ 0.43
CEACAM3P40198 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.76■□□□□ 0.43
CEACAM3P40198 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CEACAM3P40198 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CEACAM3P40198 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CEACAM3P40198 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CEACAM3P40198 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CEACAM3P40198 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CEACAM3P40198 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.75■□□□□ 0.43
CEACAM3P40198 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CEACAM3P40198 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.75■□□□□ 0.43
CEACAM3P40198 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CEACAM3P40198 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 AC091305.1-201ENST00000479476 895 ntBASIC17.75■□□□□ 0.43
CEACAM3P40198 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.75■□□□□ 0.43
CEACAM3P40198 AC142381.2-201ENST00000566120 298 ntBASIC17.75■□□□□ 0.43
CEACAM3P40198 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.75■□□□□ 0.43
CEACAM3P40198 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CEACAM3P40198 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.75■□□□□ 0.43
CEACAM3P40198 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CEACAM3P40198 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.74■□□□□ 0.43
CEACAM3P40198 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CEACAM3P40198 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CEACAM3P40198 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CEACAM3P40198 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.74■□□□□ 0.43
CEACAM3P40198 AL031602.1-201ENST00000633169 911 ntBASIC17.74■□□□□ 0.43
CEACAM3P40198 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.74■□□□□ 0.43
CEACAM3P40198 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CEACAM3P40198 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CEACAM3P40198 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CEACAM3P40198 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CEACAM3P40198 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CEACAM3P40198 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CEACAM3P40198 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
CEACAM3P40198 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CEACAM3P40198 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.73■□□□□ 0.43
CEACAM3P40198 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.73■□□□□ 0.43
CEACAM3P40198 AC099791.1-201ENST00000416440 715 ntBASIC17.73■□□□□ 0.43
CEACAM3P40198 AP001330.3-201ENST00000520123 633 ntBASIC17.73■□□□□ 0.43
CEACAM3P40198 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.73■□□□□ 0.43
CEACAM3P40198 AC010525.1-201ENST00000585559 441 ntBASIC17.73■□□□□ 0.43
CEACAM3P40198 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.73■□□□□ 0.43
CEACAM3P40198 RASA4CP-201ENST00000424092 1398 ntBASIC17.73■□□□□ 0.43
CEACAM3P40198 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CEACAM3P40198 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CEACAM3P40198 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CEACAM3P40198 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CEACAM3P40198 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.72■□□□□ 0.43
CEACAM3P40198 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.72■□□□□ 0.43
CEACAM3P40198 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CEACAM3P40198 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.72■□□□□ 0.43
CEACAM3P40198 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CEACAM3P40198 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CEACAM3P40198 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CEACAM3P40198 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CEACAM3P40198 MIR939-201ENST00000401314 82 ntBASIC17.72■□□□□ 0.43
CEACAM3P40198 AC010141.3-201ENST00000456659 717 ntBASIC17.72■□□□□ 0.43
CEACAM3P40198 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.72■□□□□ 0.43
CEACAM3P40198 AF213884.3-201ENST00000563833 479 ntBASIC17.72■□□□□ 0.43
CEACAM3P40198 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CEACAM3P40198 AC005837.3-201ENST00000612163 286 ntBASIC17.72■□□□□ 0.43
CEACAM3P40198 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.72■□□□□ 0.43
CEACAM3P40198 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.72■□□□□ 0.43
CEACAM3P40198 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CEACAM3P40198 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.72■□□□□ 0.43
CEACAM3P40198 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CEACAM3P40198 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CEACAM3P40198 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CEACAM3P40198 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CEACAM3P40198 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CEACAM3P40198 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CEACAM3P40198 MIR638-201ENST00000385237 100 ntBASIC17.71■□□□□ 0.43
CEACAM3P40198 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CEACAM3P40198 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.71■□□□□ 0.43
CEACAM3P40198 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.71■□□□□ 0.43
CEACAM3P40198 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.71■□□□□ 0.43
CEACAM3P40198 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.71■□□□□ 0.43
CEACAM3P40198 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CEACAM3P40198 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CEACAM3P40198 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CEACAM3P40198 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CEACAM3P40198 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CEACAM3P40198 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CEACAM3P40198 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CEACAM3P40198 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CEACAM3P40198 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CEACAM3P40198 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms