Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.06□□□□□ -0.962e-6■■□□□ 11.6
SFPQP23246 ASAH1-220ENST00000636050 2546 ntTSL 58.86□□□□□ -0.992e-6■■□□□ 11.6
SFPQP23246 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.65□□□□□ -1.022e-6■■□□□ 11.6
SFPQP23246 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.61□□□□□ -1.032e-6■■□□□ 11.6
SFPQP23246 NAP1L4-219ENST00000531291 572 ntTSL 58.43□□□□□ -1.065e-7■■□□□ 11.6
SFPQP23246 ASAH1-260ENST00000637805 780 ntTSL 58.25□□□□□ -1.092e-6■■□□□ 11.6
SFPQP23246 PRKCZ-217ENST00000481140 713 ntTSL 48.17□□□□□ -1.13e-8■■□□□ 11.6
SFPQP23246 NAP1L4-216ENST00000528968 587 ntTSL 57.64□□□□□ -1.195e-7■■□□□ 11.6
SFPQP23246 ASAH1-234ENST00000636715 1025 ntTSL 57.62□□□□□ -1.192e-6■■□□□ 11.6
SFPQP23246 NAP1L4-220ENST00000532325 526 ntTSL 56.17□□□□□ -1.425e-7■■□□□ 11.6
SFPQP23246 NAP1L4-217ENST00000529361 555 ntTSL 56.15□□□□□ -1.425e-7■■□□□ 11.6
SFPQP23246 ASAH1-238ENST00000636828 3365 ntTSL 26.01□□□□□ -1.452e-6■■□□□ 11.6
SFPQP23246 NAP1L4-202ENST00000399614 594 ntTSL 44.9□□□□□ -1.635e-7■■□□□ 11.6
SFPQP23246 NAP1L4-204ENST00000448187 888 ntTSL 54.34□□□□□ -1.715e-7■■□□□ 11.6
SFPQP23246 PPP6R3-215ENST00000528635 538 ntTSL 417.54■□□□□ 0.42e-6■■□□□ 11.6
SFPQP23246 PPP6R3-217ENST00000529344 603 ntTSL 417.54■□□□□ 0.42e-6■■□□□ 11.6
SFPQP23246 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC13.3□□□□□ -0.282e-6■■□□□ 11.6
SFPQP23246 PPP6R3-220ENST00000530427 560 ntTSL 512.6□□□□□ -0.392e-6■■□□□ 11.6
SFPQP23246 PPP6R3-201ENST00000265636 4794 ntTSL 1 (best) BASIC12.56□□□□□ -0.42e-6■■□□□ 11.6
SFPQP23246 PPP6R3-203ENST00000393800 5093 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.412e-6■■□□□ 11.6
SFPQP23246 PPP6R3-205ENST00000524845 2771 ntTSL 1 (best) BASIC12.32□□□□□ -0.442e-6■■□□□ 11.6
SFPQP23246 PPP6R3-226ENST00000534534 2968 ntTSL 2 BASIC11.89□□□□□ -0.512e-6■■□□□ 11.6
SFPQP23246 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC11.84□□□□□ -0.512e-6■■□□□ 11.6
SFPQP23246 PPP6R3-219ENST00000529907 826 ntTSL 510.95□□□□□ -0.662e-6■■□□□ 11.6
SFPQP23246 PPP6R3-224ENST00000533127 551 ntTSL 410.95□□□□□ -0.662e-6■■□□□ 11.6
SFPQP23246 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC9.28□□□□□ -0.922e-6■■□□□ 11.6
SFPQP23246 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -12e-6■■□□□ 11.6
SFPQP23246 JPX-213ENST00000640437 1620 ntTSL 518.53■□□□□ 0.564e-6■■□□□ 11.6
SFPQP23246 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC13.4□□□□□ -0.264e-6■■□□□ 11.6
SFPQP23246 JPX-201ENST00000414209 2194 ntTSL 2 BASIC12.01□□□□□ -0.494e-6■■□□□ 11.6
SFPQP23246 JPX-205ENST00000602546 762 ntTSL 311.27□□□□□ -0.614e-6■■□□□ 11.6
SFPQP23246 JPX-208ENST00000602895 829 ntTSL 311.08□□□□□ -0.644e-6■■□□□ 11.6
SFPQP23246 JPX-209ENST00000602920 625 ntTSL 210.25□□□□□ -0.774e-6■■□□□ 11.6
SFPQP23246 JPX-210ENST00000602938 581 ntTSL 29.23□□□□□ -0.934e-6■■□□□ 11.6
SFPQP23246 JPX-211ENST00000602985 476 ntTSL 38.87□□□□□ -0.994e-6■■□□□ 11.6
SFPQP23246 JPX-204ENST00000602294 502 ntTSL 28.75□□□□□ -1.014e-6■■□□□ 11.6
SFPQP23246 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.04□□□□□ -1.124e-6■■□□□ 11.6
SFPQP23246 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.121e-7■■□□□ 11.6
SFPQP23246 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.091e-7■■□□□ 11.6
SFPQP23246 NSD2-210ENST00000482415 3602 ntTSL 1 (best)14.44□□□□□ -0.11e-7■■□□□ 11.6
SFPQP23246 NSD2-225ENST00000514329 851 ntTSL 314.22□□□□□ -0.131e-7■■□□□ 11.6
SFPQP23246 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.281e-7■■□□□ 11.6
SFPQP23246 NSD2-223ENST00000513726 648 ntTSL 312.58□□□□□ -0.41e-7■■□□□ 11.6
SFPQP23246 NSD2-202ENST00000353275 7980 ntTSL 1 (best)12.38□□□□□ -0.431e-7■■□□□ 11.6
SFPQP23246 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC12.01□□□□□ -0.491e-7■■□□□ 11.6
SFPQP23246 NSD2-201ENST00000312087 8050 ntTSL 1 (best)11.56□□□□□ -0.561e-7■■□□□ 11.6
SFPQP23246 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC11.12□□□□□ -0.631e-7■■□□□ 11.6
SFPQP23246 NSD2-221ENST00000511904 690 ntTSL 58.77□□□□□ -1.011e-7■■□□□ 11.6
SFPQP23246 NSD2-211ENST00000502425 421 ntTSL 37.38□□□□□ -1.231e-7■■□□□ 11.6
SFPQP23246 EEF1D-217ENST00000526786 1246 ntTSL 225.64■■□□□ 1.72e-7■■□□□ 11.6
SFPQP23246 EEF1D-241ENST00000531931 614 ntTSL 325.64■■□□□ 1.72e-7■■□□□ 11.6
SFPQP23246 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.44■■□□□ 1.662e-7■■□□□ 11.6
SFPQP23246 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.662e-7■■□□□ 11.6
SFPQP23246 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.612e-7■■□□□ 11.6
SFPQP23246 EEF1D-212ENST00000525695 907 ntTSL 525.09■■□□□ 1.612e-7■■□□□ 11.6
SFPQP23246 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.85■■□□□ 1.412e-7■■□□□ 11.6
SFPQP23246 EEF1D-216ENST00000526710 996 ntTSL 222.99■■□□□ 1.272e-7■■□□□ 11.6
SFPQP23246 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.112e-7■■□□□ 11.6
SFPQP23246 EEF1D-235ENST00000530848 688 ntTSL 321.62■■□□□ 1.052e-7■■□□□ 11.6
SFPQP23246 EEF1D-228ENST00000529832 600 ntTSL 420.88■□□□□ 0.932e-7■■□□□ 11.6
SFPQP23246 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.932e-7■■□□□ 11.6
SFPQP23246 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.912e-7■■□□□ 11.6
SFPQP23246 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.61■□□□□ 0.892e-7■■□□□ 11.6
SFPQP23246 EEF1D-249ENST00000533749 633 ntTSL 519.68■□□□□ 0.742e-7■■□□□ 11.6
SFPQP23246 EEF1D-209ENST00000524900 343 ntTSL 519.53■□□□□ 0.722e-7■■□□□ 11.6
SFPQP23246 EEF1D-206ENST00000524397 957 ntTSL 319.32■□□□□ 0.682e-7■■□□□ 11.6
SFPQP23246 EEF1D-224ENST00000529007 861 ntTSL 219.32■□□□□ 0.682e-7■■□□□ 11.6
SFPQP23246 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.32■□□□□ 0.682e-7■■□□□ 11.6
SFPQP23246 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.622e-7■■□□□ 11.6
SFPQP23246 EEF1D-250ENST00000533833 831 ntTSL 518.78■□□□□ 0.62e-7■■□□□ 11.6
SFPQP23246 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.412e-7■■□□□ 11.6
SFPQP23246 EEF1D-231ENST00000530306 583 ntTSL 217.33■□□□□ 0.362e-7■■□□□ 11.6
SFPQP23246 EEF1D-230ENST00000530191 853 ntTSL 317.23■□□□□ 0.352e-7■■□□□ 11.6
SFPQP23246 EEF1D-251ENST00000534232 817 ntTSL 516.81■□□□□ 0.282e-7■■□□□ 11.6
SFPQP23246 EEF1D-211ENST00000525261 559 ntTSL 216.59■□□□□ 0.252e-7■■□□□ 11.6
SFPQP23246 EEF1D-245ENST00000532596 761 ntTSL 416.59■□□□□ 0.252e-7■■□□□ 11.6
SFPQP23246 EEF1D-252ENST00000534377 617 ntTSL 216.55■□□□□ 0.242e-7■■□□□ 11.6
SFPQP23246 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.152e-7■■□□□ 11.6
SFPQP23246 EEF1D-247ENST00000533204 842 ntTSL 215.39■□□□□ 0.052e-7■■□□□ 11.6
SFPQP23246 EEF1D-233ENST00000530545 616 ntTSL 415.24■□□□□ 0.032e-7■■□□□ 11.6
SFPQP23246 EEF1D-236ENST00000531218 787 ntTSL 315.14■□□□□ 0.012e-7■■□□□ 11.6
SFPQP23246 EEF1D-253ENST00000534380 1001 ntTSL 515.14■□□□□ 0.012e-7■■□□□ 11.6
SFPQP23246 EEF1D-215ENST00000526340 770 ntTSL 315.01□□□□□ -0.012e-7■■□□□ 11.6
SFPQP23246 EEF1D-220ENST00000528303 558 ntTSL 414.5□□□□□ -0.092e-7■■□□□ 11.6
SFPQP23246 EEF1D-248ENST00000533494 758 ntTSL 514.25□□□□□ -0.132e-7■■□□□ 11.6
SFPQP23246 EEF1D-254ENST00000534475 538 ntTSL 414.02□□□□□ -0.172e-7■■□□□ 11.6
SFPQP23246 EEF1D-226ENST00000529516 473 ntTSL 310.11□□□□□ -0.792e-7■■□□□ 11.6
SFPQP23246 EEF1D-255ENST00000534804 555 ntTSL 49.43□□□□□ -0.92e-7■■□□□ 11.6
SFPQP23246 GMDS-209ENST00000531690 515 ntTSL 57.27□□□□□ -1.256e-7■■□□□ 11.6
SFPQP23246 EEF1D-240ENST00000531770 589 ntTSL 415.8■□□□□ 0.122e-7■■□□□ 11.6
SFPQP23246 MSI2-207ENST00000579205 500 ntTSL 416.23■□□□□ 0.192e-6■■□□□ 11.5
SFPQP23246 FOXN3-206ENST00000554005 450 ntTSL 55.8□□□□□ -1.483e-6■■□□□ 11.5
SFPQP23246 SEPT9-238ENST00000591472 555 ntTSL 413.23□□□□□ -0.291e-6■■□□□ 11.5
SFPQP23246 CAPN15-208ENST00000637507 1482 ntTSL 524.49■■□□□ 1.512e-6■■□□□ 11.5
SFPQP23246 CALM2-207ENST00000484408 682 ntTSL 522.8■■□□□ 1.241e-8■■□□□ 11.5
SFPQP23246 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.971e-8■■□□□ 11.5
SFPQP23246 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.28■□□□□ 0.841e-8■■□□□ 11.5
SFPQP23246 CALM2-208ENST00000489742 522 ntTSL 317.87■□□□□ 0.451e-8■■□□□ 11.5
SFPQP23246 CALM2-203ENST00000432899 1004 ntTSL 515.15■□□□□ 0.021e-8■■□□□ 11.5
SFPQP23246 STPG4-206ENST00000422269 983 ntTSL 212.28□□□□□ -0.441e-8■■□□□ 11.5
Retrieved 100 of 4,991 protein–RNA pairs in 174.1 ms