Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.84■■□□□ 1.41
CLTAP09496 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLTAP09496 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTAP09496 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CLTAP09496 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLTAP09496 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLTAP09496 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLTAP09496 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLTAP09496 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLTAP09496 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
CLTAP09496 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLTAP09496 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLTAP09496 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
CLTAP09496 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CLTAP09496 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.83■■□□□ 1.4
CLTAP09496 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CLTAP09496 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLTAP09496 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLTAP09496 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.82■■□□□ 1.4
CLTAP09496 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLTAP09496 MIR935-201ENST00000401179 91 ntBASIC23.82■■□□□ 1.4
CLTAP09496 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLTAP09496 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.82■■□□□ 1.4
CLTAP09496 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CLTAP09496 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CLTAP09496 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLTAP09496 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.82■■□□□ 1.4
CLTAP09496 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTAP09496 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTAP09496 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLTAP09496 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.81■■□□□ 1.4
CLTAP09496 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTAP09496 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CLTAP09496 MIR572-201ENST00000384983 95 ntBASIC23.81■■□□□ 1.4
CLTAP09496 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.81■■□□□ 1.4
CLTAP09496 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.81■■□□□ 1.4
CLTAP09496 AC087239.1-201ENST00000622671 572 ntBASIC23.81■■□□□ 1.4
CLTAP09496 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CLTAP09496 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.81■■□□□ 1.4
CLTAP09496 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTAP09496 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.81■■□□□ 1.4
CLTAP09496 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLTAP09496 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.8■■□□□ 1.4
CLTAP09496 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLTAP09496 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLTAP09496 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLTAP09496 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.8■■□□□ 1.4
CLTAP09496 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLTAP09496 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
CLTAP09496 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CLTAP09496 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CLTAP09496 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.8■■□□□ 1.4
CLTAP09496 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.8■■□□□ 1.4
CLTAP09496 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLTAP09496 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CLTAP09496 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTAP09496 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CLTAP09496 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTAP09496 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.79■■□□□ 1.4
CLTAP09496 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTAP09496 AC010141.3-201ENST00000456659 717 ntBASIC23.79■■□□□ 1.4
CLTAP09496 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.79■■□□□ 1.4
CLTAP09496 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.79■■□□□ 1.4
CLTAP09496 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLTAP09496 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.79■■□□□ 1.4
CLTAP09496 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLTAP09496 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.78■■□□□ 1.4
CLTAP09496 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLTAP09496 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLTAP09496 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
CLTAP09496 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLTAP09496 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.78■■□□□ 1.4
CLTAP09496 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.77■■□□□ 1.4
CLTAP09496 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLTAP09496 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.77■■□□□ 1.4
CLTAP09496 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLTAP09496 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CLTAP09496 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLTAP09496 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLTAP09496 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.77■■□□□ 1.4
CLTAP09496 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.77■■□□□ 1.4
CLTAP09496 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLTAP09496 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CLTAP09496 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLTAP09496 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.77■■□□□ 1.4
CLTAP09496 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.77■■□□□ 1.4
CLTAP09496 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CLTAP09496 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
CLTAP09496 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTAP09496 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTAP09496 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CLTAP09496 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CLTAP09496 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTAP09496 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTAP09496 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CLTAP09496 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLTAP09496 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTAP09496 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTAP09496 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTAP09496 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms