Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP1A1P05023 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ATP1A1P05023 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP1A1P05023 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP1A1P05023 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP1A1P05023 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ATP1A1P05023 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP1A1P05023 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP1A1P05023 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.2■■□□□ 1.3
ATP1A1P05023 SNX5-217ENST00000606557 1087 ntBASIC23.2■■□□□ 1.3
ATP1A1P05023 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP1A1P05023 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP1A1P05023 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP1A1P05023 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.2■■□□□ 1.3
ATP1A1P05023 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP1A1P05023 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ATP1A1P05023 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP1A1P05023 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP1A1P05023 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ATP1A1P05023 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP1A1P05023 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
ATP1A1P05023 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP1A1P05023 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP1A1P05023 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP1A1P05023 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
ATP1A1P05023 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP1A1P05023 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP1A1P05023 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP1A1P05023 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP1A1P05023 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP1A1P05023 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP1A1P05023 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
ATP1A1P05023 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP1A1P05023 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
ATP1A1P05023 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 AC239859.2-201ENST00000444165 318 ntBASIC23.18■■□□□ 1.3
ATP1A1P05023 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP1A1P05023 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP1A1P05023 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP1A1P05023 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ATP1A1P05023 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
ATP1A1P05023 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ATP1A1P05023 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
ATP1A1P05023 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP1A1P05023 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP1A1P05023 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ATP1A1P05023 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP1A1P05023 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP1A1P05023 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP1A1P05023 AC073130.3-201ENST00000624389 2278 ntBASIC23.17■■□□□ 1.3
ATP1A1P05023 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP1A1P05023 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP1A1P05023 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP1A1P05023 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP1A1P05023 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP1A1P05023 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP1A1P05023 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP1A1P05023 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
ATP1A1P05023 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP1A1P05023 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP1A1P05023 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP1A1P05023 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
ATP1A1P05023 AC244015.2-201ENST00000616358 1861 ntBASIC23.15■■□□□ 1.3
ATP1A1P05023 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP1A1P05023 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP1A1P05023 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.15■■□□□ 1.3
ATP1A1P05023 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP1A1P05023 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP1A1P05023 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP1A1P05023 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.15■■□□□ 1.3
ATP1A1P05023 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ATP1A1P05023 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.15■■□□□ 1.3
ATP1A1P05023 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP1A1P05023 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP1A1P05023 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ATP1A1P05023 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
ATP1A1P05023 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP1A1P05023 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP1A1P05023 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP1A1P05023 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP1A1P05023 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.14■■□□□ 1.29
ATP1A1P05023 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP1A1P05023 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
ATP1A1P05023 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP1A1P05023 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP1A1P05023 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.14■■□□□ 1.29
ATP1A1P05023 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP1A1P05023 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP1A1P05023 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP1A1P05023 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
ATP1A1P05023 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ATP1A1P05023 BX664725.1-201ENST00000438252 379 ntBASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms