Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.16■■□□□ 1.14
MT-ND3P03897 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.16■■□□□ 1.14
MT-ND3P03897 AC131281.2-201ENST00000520478 145 ntBASIC22.16■■□□□ 1.14
MT-ND3P03897 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.16■■□□□ 1.14
MT-ND3P03897 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.16■■□□□ 1.14
MT-ND3P03897 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-ND3P03897 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-ND3P03897 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MT-ND3P03897 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.16■■□□□ 1.14
MT-ND3P03897 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-ND3P03897 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MT-ND3P03897 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-ND3P03897 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-ND3P03897 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-ND3P03897 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-ND3P03897 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
MT-ND3P03897 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-ND3P03897 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.15■■□□□ 1.14
MT-ND3P03897 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MT-ND3P03897 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-ND3P03897 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-ND3P03897 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
MT-ND3P03897 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MT-ND3P03897 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MT-ND3P03897 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
MT-ND3P03897 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.14■■□□□ 1.13
MT-ND3P03897 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-ND3P03897 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-ND3P03897 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MT-ND3P03897 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.14■■□□□ 1.13
MT-ND3P03897 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
MT-ND3P03897 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-ND3P03897 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-ND3P03897 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.13■■□□□ 1.13
MT-ND3P03897 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.13■■□□□ 1.13
MT-ND3P03897 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MT-ND3P03897 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
MT-ND3P03897 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MT-ND3P03897 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.13■■□□□ 1.13
MT-ND3P03897 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MT-ND3P03897 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.13■■□□□ 1.13
MT-ND3P03897 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MT-ND3P03897 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.13■■□□□ 1.13
MT-ND3P03897 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.13■■□□□ 1.13
MT-ND3P03897 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MT-ND3P03897 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.13■■□□□ 1.13
MT-ND3P03897 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
MT-ND3P03897 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.13■■□□□ 1.13
MT-ND3P03897 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
MT-ND3P03897 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MT-ND3P03897 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-ND3P03897 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.12■■□□□ 1.13
MT-ND3P03897 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.12■■□□□ 1.13
MT-ND3P03897 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.12■■□□□ 1.13
MT-ND3P03897 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-ND3P03897 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-ND3P03897 AL136116.3-201ENST00000402907 1138 ntBASIC22.12■■□□□ 1.13
MT-ND3P03897 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.12■■□□□ 1.13
MT-ND3P03897 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
MT-ND3P03897 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-ND3P03897 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.12■■□□□ 1.13
MT-ND3P03897 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.12■■□□□ 1.13
MT-ND3P03897 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-ND3P03897 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-ND3P03897 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MT-ND3P03897 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MT-ND3P03897 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
MT-ND3P03897 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
MT-ND3P03897 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
MT-ND3P03897 AL139246.5-201ENST00000606645 996 ntBASIC22.11■■□□□ 1.13
MT-ND3P03897 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MT-ND3P03897 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MT-ND3P03897 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MT-ND3P03897 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MT-ND3P03897 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MT-ND3P03897 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
MT-ND3P03897 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MT-ND3P03897 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
MT-ND3P03897 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MT-ND3P03897 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.1■■□□□ 1.13
MT-ND3P03897 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.1■■□□□ 1.13
MT-ND3P03897 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.1■■□□□ 1.13
MT-ND3P03897 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
MT-ND3P03897 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.1■■□□□ 1.13
MT-ND3P03897 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
MT-ND3P03897 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
MT-ND3P03897 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
MT-ND3P03897 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.09■■□□□ 1.13
MT-ND3P03897 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.09■■□□□ 1.13
MT-ND3P03897 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.09■■□□□ 1.13
MT-ND3P03897 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.09■■□□□ 1.13
MT-ND3P03897 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.09■■□□□ 1.13
MT-ND3P03897 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms