Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.78■■□□□ 1.56
TDP2O95551 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
TDP2O95551 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TDP2O95551 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TDP2O95551 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.77■■□□□ 1.56
TDP2O95551 AC010141.3-201ENST00000456659 717 ntBASIC24.77■■□□□ 1.56
TDP2O95551 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.77■■□□□ 1.56
TDP2O95551 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
TDP2O95551 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.77■■□□□ 1.56
TDP2O95551 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.77■■□□□ 1.56
TDP2O95551 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TDP2O95551 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TDP2O95551 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.77■■□□□ 1.56
TDP2O95551 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TDP2O95551 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TDP2O95551 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TDP2O95551 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TDP2O95551 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TDP2O95551 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TDP2O95551 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TDP2O95551 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TDP2O95551 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TDP2O95551 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TDP2O95551 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TDP2O95551 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.76■■□□□ 1.55
TDP2O95551 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TDP2O95551 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TDP2O95551 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
TDP2O95551 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
TDP2O95551 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.75■■□□□ 1.55
TDP2O95551 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.75■■□□□ 1.55
TDP2O95551 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.75■■□□□ 1.55
TDP2O95551 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TDP2O95551 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TDP2O95551 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.75■■□□□ 1.55
TDP2O95551 AC137767.1-201ENST00000602918 1920 ntBASIC24.74■■□□□ 1.55
TDP2O95551 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.74■■□□□ 1.55
TDP2O95551 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.74■■□□□ 1.55
TDP2O95551 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.74■■□□□ 1.55
TDP2O95551 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
TDP2O95551 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TDP2O95551 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.73■■□□□ 1.55
TDP2O95551 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TDP2O95551 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TDP2O95551 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TDP2O95551 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.73■■□□□ 1.55
TDP2O95551 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TDP2O95551 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TDP2O95551 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TDP2O95551 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.73■■□□□ 1.55
TDP2O95551 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.73■■□□□ 1.55
TDP2O95551 AC087239.1-201ENST00000622671 572 ntBASIC24.73■■□□□ 1.55
TDP2O95551 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TDP2O95551 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
TDP2O95551 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
TDP2O95551 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
TDP2O95551 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TDP2O95551 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.72■■□□□ 1.55
TDP2O95551 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TDP2O95551 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TDP2O95551 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
TDP2O95551 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TDP2O95551 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.72■■□□□ 1.55
TDP2O95551 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TDP2O95551 OXCT2P1-201ENST00000447263 1535 ntBASIC24.71■■□□□ 1.55
TDP2O95551 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
TDP2O95551 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.71■■□□□ 1.55
TDP2O95551 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TDP2O95551 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.71■■□□□ 1.55
TDP2O95551 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.71■■□□□ 1.55
TDP2O95551 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
TDP2O95551 AC080038.3-201ENST00000623346 1952 ntBASIC24.71■■□□□ 1.55
TDP2O95551 ESRRAP2-201ENST00000418437 1549 ntBASIC24.71■■□□□ 1.55
TDP2O95551 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.7■■□□□ 1.55
TDP2O95551 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
TDP2O95551 AC233723.2-201ENST00000623798 2106 ntBASIC24.7■■□□□ 1.54
TDP2O95551 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
TDP2O95551 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TDP2O95551 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TDP2O95551 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TDP2O95551 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.7■■□□□ 1.54
TDP2O95551 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.7■■□□□ 1.54
TDP2O95551 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.7■■□□□ 1.54
TDP2O95551 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TDP2O95551 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
TDP2O95551 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.7■■□□□ 1.54
TDP2O95551 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TDP2O95551 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TDP2O95551 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TDP2O95551 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TDP2O95551 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms