Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA12O60330 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.65■■□□□ 1.06
PCDHGA12O60330 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGA12O60330 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGA12O60330 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHGA12O60330 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGA12O60330 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA12O60330 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PCDHGA12O60330 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA12O60330 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA12O60330 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA12O60330 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGA12O60330 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGA12O60330 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDHGA12O60330 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDHGA12O60330 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA12O60330 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA12O60330 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.64■■□□□ 1.05
PCDHGA12O60330 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA12O60330 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA12O60330 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHGA12O60330 TPRG1LP1-201ENST00000598702 760 ntBASIC21.64■■□□□ 1.05
PCDHGA12O60330 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA12O60330 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGA12O60330 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHGA12O60330 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGA12O60330 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGA12O60330 KRT18P61-201ENST00000585825 1298 ntBASIC21.63■■□□□ 1.05
PCDHGA12O60330 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA12O60330 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGA12O60330 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGA12O60330 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 AC016769.1-201ENST00000409132 1010 ntBASIC21.62■■□□□ 1.05
PCDHGA12O60330 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.62■■□□□ 1.05
PCDHGA12O60330 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA12O60330 AC137761.2-201ENST00000561729 223 ntBASIC21.62■■□□□ 1.05
PCDHGA12O60330 AC145350.3-201ENST00000569033 163 ntBASIC21.62■■□□□ 1.05
PCDHGA12O60330 RAP2CP1-201ENST00000605103 478 ntBASIC21.62■■□□□ 1.05
PCDHGA12O60330 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA12O60330 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGA12O60330 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA12O60330 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGA12O60330 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA12O60330 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCDHGA12O60330 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PCDHGA12O60330 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
PCDHGA12O60330 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA12O60330 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCDHGA12O60330 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHGA12O60330 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGA12O60330 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGA12O60330 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA12O60330 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA12O60330 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHGA12O60330 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHGA12O60330 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA12O60330 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGA12O60330 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA12O60330 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA12O60330 DUSP8P5-201ENST00000422884 1815 ntBASIC21.59■■□□□ 1.05
PCDHGA12O60330 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHGA12O60330 AC079834.2-201ENST00000609776 1949 ntBASIC21.59■■□□□ 1.05
PCDHGA12O60330 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.59■■□□□ 1.05
PCDHGA12O60330 CDCA4P2-201ENST00000441182 718 ntBASIC21.59■■□□□ 1.05
PCDHGA12O60330 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHGA12O60330 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHGA12O60330 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHGA12O60330 AC073111.5-205ENST00000641717 521 ntBASIC21.59■■□□□ 1.05
PCDHGA12O60330 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGA12O60330 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA12O60330 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHGA12O60330 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA12O60330 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHGA12O60330 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHGA12O60330 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA12O60330 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGA12O60330 AP004607.4-201ENST00000530158 1459 ntBASIC21.58■■□□□ 1.04
PCDHGA12O60330 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA12O60330 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA12O60330 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA12O60330 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms