Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN4O14817 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN4O14817 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TSPAN4O14817 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN4O14817 AC242852.2-201ENST00000615738 1807 ntBASIC18.15■□□□□ 0.5
TSPAN4O14817 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN4O14817 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN4O14817 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN4O14817 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TSPAN4O14817 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TSPAN4O14817 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN4O14817 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN4O14817 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
TSPAN4O14817 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN4O14817 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN4O14817 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TSPAN4O14817 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN4O14817 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN4O14817 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN4O14817 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN4O14817 KRT18P60-201ENST00000312876 1297 ntBASIC18.14■□□□□ 0.49
TSPAN4O14817 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN4O14817 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN4O14817 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.14■□□□□ 0.49
TSPAN4O14817 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.14■□□□□ 0.49
TSPAN4O14817 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TSPAN4O14817 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN4O14817 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN4O14817 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN4O14817 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TSPAN4O14817 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.13■□□□□ 0.49
TSPAN4O14817 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 AL157384.1-201ENST00000445995 2473 ntBASIC18.13■□□□□ 0.49
TSPAN4O14817 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.13■□□□□ 0.49
TSPAN4O14817 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TSPAN4O14817 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSPAN4O14817 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.12■□□□□ 0.49
TSPAN4O14817 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TSPAN4O14817 KRT18P10-201ENST00000388836 1287 ntBASIC18.12■□□□□ 0.49
TSPAN4O14817 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.12■□□□□ 0.49
TSPAN4O14817 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TSPAN4O14817 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TSPAN4O14817 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.12■□□□□ 0.49
TSPAN4O14817 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TSPAN4O14817 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TSPAN4O14817 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TSPAN4O14817 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TSPAN4O14817 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.12■□□□□ 0.49
TSPAN4O14817 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TSPAN4O14817 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN4O14817 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN4O14817 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.11■□□□□ 0.49
TSPAN4O14817 AC018755.3-202ENST00000596210 929 ntBASIC18.11■□□□□ 0.49
TSPAN4O14817 AC129492.7-201ENST00000622992 756 ntBASIC18.11■□□□□ 0.49
TSPAN4O14817 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN4O14817 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN4O14817 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TSPAN4O14817 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN4O14817 LINC01521-201ENST00000504184 1943 ntBASIC18.11■□□□□ 0.49
TSPAN4O14817 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.11■□□□□ 0.49
TSPAN4O14817 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TSPAN4O14817 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN4O14817 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TSPAN4O14817 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN4O14817 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN4O14817 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TSPAN4O14817 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TSPAN4O14817 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TSPAN4O14817 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.1■□□□□ 0.49
TSPAN4O14817 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.1■□□□□ 0.49
TSPAN4O14817 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TSPAN4O14817 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TSPAN4O14817 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN4O14817 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN4O14817 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TSPAN4O14817 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TSPAN4O14817 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN4O14817 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN4O14817 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms