Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC30.91■■■□□ 2.54
CHD2O14647 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CHD2O14647 AC098590.1-201ENST00000468126 897 ntBASIC30.91■■■□□ 2.54
CHD2O14647 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC30.91■■■□□ 2.54
CHD2O14647 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CHD2O14647 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC30.9■■■□□ 2.54
CHD2O14647 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.9■■■□□ 2.54
CHD2O14647 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CHD2O14647 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
CHD2O14647 AC133041.1-202ENST00000642053 222 ntBASIC30.89■■■□□ 2.54
CHD2O14647 ASL-203ENST00000380839 1765 ntTSL 5 BASIC30.89■■■□□ 2.54
CHD2O14647 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC30.89■■■□□ 2.54
CHD2O14647 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.89■■■□□ 2.54
CHD2O14647 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC30.89■■■□□ 2.53
CHD2O14647 RPS2P52-201ENST00000469610 820 ntBASIC30.89■■■□□ 2.53
CHD2O14647 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CHD2O14647 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CHD2O14647 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC30.88■■■□□ 2.53
CHD2O14647 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD2O14647 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD2O14647 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD2O14647 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CHD2O14647 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30.88■■■□□ 2.53
CHD2O14647 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD2O14647 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD2O14647 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CHD2O14647 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD2O14647 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD2O14647 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC30.87■■■□□ 2.53
CHD2O14647 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
CHD2O14647 APTR-203ENST00000430801 583 ntTSL 5 BASIC30.87■■■□□ 2.53
CHD2O14647 SLC7A5P1-201ENST00000568957 537 ntBASIC30.87■■■□□ 2.53
CHD2O14647 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC30.87■■■□□ 2.53
CHD2O14647 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHD2O14647 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC30.87■■■□□ 2.53
CHD2O14647 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CHD2O14647 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHD2O14647 BRI3-207ENST00000539286 699 ntTSL 2 BASIC30.87■■■□□ 2.53
CHD2O14647 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC30.87■■■□□ 2.53
CHD2O14647 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CHD2O14647 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHD2O14647 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CHD2O14647 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC30.86■■■□□ 2.53
CHD2O14647 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHD2O14647 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHD2O14647 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC30.85■■■□□ 2.53
CHD2O14647 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHD2O14647 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CHD2O14647 AC135731.1-201ENST00000569415 2548 ntBASIC30.85■■■□□ 2.53
CHD2O14647 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC30.84■■■□□ 2.53
CHD2O14647 MARS-234ENST00000630571 216 ntTSL 5 BASIC30.84■■■□□ 2.53
CHD2O14647 MARS-235ENST00000630803 183 ntTSL 3 BASIC30.84■■■□□ 2.53
CHD2O14647 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC30.84■■■□□ 2.53
CHD2O14647 MFF-207ENST00000409565 1548 ntTSL 2 BASIC30.84■■■□□ 2.53
CHD2O14647 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC30.84■■■□□ 2.53
CHD2O14647 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC30.84■■■□□ 2.53
CHD2O14647 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC30.84■■■□□ 2.53
CHD2O14647 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
CHD2O14647 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CHD2O14647 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHD2O14647 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHD2O14647 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
CHD2O14647 PRORSD1P-201ENST00000295112 541 ntBASIC30.82■■■□□ 2.52
CHD2O14647 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC30.82■■■□□ 2.52
CHD2O14647 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CHD2O14647 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC30.82■■■□□ 2.52
CHD2O14647 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC30.82■■■□□ 2.52
CHD2O14647 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CHD2O14647 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.52
CHD2O14647 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.82■■■□□ 2.52
CHD2O14647 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHD2O14647 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHD2O14647 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC30.82■■■□□ 2.52
CHD2O14647 CYP2T1P-201ENST00000432607 1285 ntBASIC30.82■■■□□ 2.52
CHD2O14647 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CHD2O14647 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CHD2O14647 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.52
CHD2O14647 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.81■■■□□ 2.52
CHD2O14647 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
CHD2O14647 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CHD2O14647 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.81■■■□□ 2.52
CHD2O14647 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CHD2O14647 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC30.81■■■□□ 2.52
CHD2O14647 RNA5SP413-201ENST00000516373 109 ntBASIC30.81■■■□□ 2.52
CHD2O14647 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC30.81■■■□□ 2.52
CHD2O14647 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CHD2O14647 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CHD2O14647 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC30.81■■■□□ 2.52
CHD2O14647 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CHD2O14647 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHD2O14647 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHD2O14647 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHD2O14647 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHD2O14647 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC30.8■■■□□ 2.52
CHD2O14647 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CHD2O14647 AC105036.2-201ENST00000569468 176 ntBASIC30.8■■■□□ 2.52
CHD2O14647 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
CHD2O14647 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CHD2O14647 AC022211.4-201ENST00000625094 2161 ntBASIC30.79■■■□□ 2.52
CHD2O14647 AC009237.3-201ENST00000393279 1427 ntBASIC30.79■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms