Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RTCAO00442 OR2I1P-207ENST00000453522 948 ntBASIC20.84■□□□□ 0.93
RTCAO00442 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RTCAO00442 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTCAO00442 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTCAO00442 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTCAO00442 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTCAO00442 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTCAO00442 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RTCAO00442 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RTCAO00442 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTCAO00442 MIR4767-201ENST00000582827 78 ntBASIC20.83■□□□□ 0.93
RTCAO00442 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RTCAO00442 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTCAO00442 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.83■□□□□ 0.92
RTCAO00442 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCAO00442 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCAO00442 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCAO00442 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCAO00442 SLC47A1P1-202ENST00000449666 945 ntBASIC20.82■□□□□ 0.92
RTCAO00442 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.82■□□□□ 0.92
RTCAO00442 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCAO00442 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.82■□□□□ 0.92
RTCAO00442 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
RTCAO00442 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCAO00442 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.82■□□□□ 0.92
RTCAO00442 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCAO00442 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RTCAO00442 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.82■□□□□ 0.92
RTCAO00442 AC135279.3-201ENST00000610945 1311 ntBASIC20.81■□□□□ 0.92
RTCAO00442 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.81■□□□□ 0.92
RTCAO00442 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
RTCAO00442 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCAO00442 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTCAO00442 AC137767.1-201ENST00000602918 1920 ntBASIC20.81■□□□□ 0.92
RTCAO00442 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.81■□□□□ 0.92
RTCAO00442 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.81■□□□□ 0.92
RTCAO00442 AC110285.6-201ENST00000617652 491 ntBASIC20.81■□□□□ 0.92
RTCAO00442 AL031602.1-201ENST00000633169 911 ntBASIC20.81■□□□□ 0.92
RTCAO00442 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
RTCAO00442 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCAO00442 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCAO00442 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCAO00442 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RTCAO00442 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCAO00442 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCAO00442 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCAO00442 PBX2P1-201ENST00000493219 1291 ntBASIC20.8■□□□□ 0.92
RTCAO00442 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.8■□□□□ 0.92
RTCAO00442 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.8■□□□□ 0.92
RTCAO00442 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCAO00442 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.8■□□□□ 0.92
RTCAO00442 AC242852.2-201ENST00000615738 1807 ntBASIC20.8■□□□□ 0.92
RTCAO00442 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCAO00442 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RTCAO00442 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
RTCAO00442 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.79■□□□□ 0.92
RTCAO00442 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCAO00442 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCAO00442 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RTCAO00442 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.79■□□□□ 0.92
RTCAO00442 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.79■□□□□ 0.92
RTCAO00442 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RTCAO00442 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCAO00442 AC139530.1-201ENST00000575312 1977 ntBASIC20.79■□□□□ 0.92
RTCAO00442 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCAO00442 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCAO00442 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCAO00442 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCAO00442 ECEL1P1-201ENST00000373592 1742 ntBASIC20.78■□□□□ 0.92
RTCAO00442 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RTCAO00442 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.78■□□□□ 0.92
RTCAO00442 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.78■□□□□ 0.92
RTCAO00442 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCAO00442 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCAO00442 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.78■□□□□ 0.92
RTCAO00442 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.78■□□□□ 0.92
RTCAO00442 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.78■□□□□ 0.92
RTCAO00442 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCAO00442 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.78■□□□□ 0.92
RTCAO00442 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
RTCAO00442 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCAO00442 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
RTCAO00442 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCAO00442 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTCAO00442 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTCAO00442 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCAO00442 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCAO00442 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCAO00442 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.77■□□□□ 0.92
RTCAO00442 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCAO00442 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.77■□□□□ 0.92
RTCAO00442 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTCAO00442 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
RTCAO00442 CA15P2-201ENST00000611168 834 ntBASIC20.77■□□□□ 0.92
RTCAO00442 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms