Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCP4L1A6NKN8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.22■□□□□ 0.35
PCP4L1A6NKN8 AC242852.2-201ENST00000615738 1807 ntBASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCP4L1A6NKN8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCP4L1A6NKN8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCP4L1A6NKN8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 AC011270.2-201ENST00000624293 2550 ntBASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCP4L1A6NKN8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
PCP4L1A6NKN8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms