Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HMX3A6NHT5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.87■□□□□ 0.61
HMX3A6NHT5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.87■□□□□ 0.61
HMX3A6NHT5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMX3A6NHT5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.87■□□□□ 0.61
HMX3A6NHT5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.87■□□□□ 0.61
HMX3A6NHT5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HMX3A6NHT5 AC026202.3-201ENST00000600805 1127 ntBASIC18.87■□□□□ 0.61
HMX3A6NHT5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.87■□□□□ 0.61
HMX3A6NHT5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMX3A6NHT5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMX3A6NHT5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMX3A6NHT5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
HMX3A6NHT5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.86■□□□□ 0.61
HMX3A6NHT5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.86■□□□□ 0.61
HMX3A6NHT5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.86■□□□□ 0.61
HMX3A6NHT5 RAP2CP1-202ENST00000605179 643 ntBASIC18.86■□□□□ 0.61
HMX3A6NHT5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
HMX3A6NHT5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
HMX3A6NHT5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMX3A6NHT5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMX3A6NHT5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMX3A6NHT5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMX3A6NHT5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMX3A6NHT5 RNF126P1-201ENST00000567452 1320 ntBASIC18.85■□□□□ 0.61
HMX3A6NHT5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.85■□□□□ 0.61
HMX3A6NHT5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMX3A6NHT5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMX3A6NHT5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.85■□□□□ 0.61
HMX3A6NHT5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HMX3A6NHT5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
HMX3A6NHT5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMX3A6NHT5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.85■□□□□ 0.61
HMX3A6NHT5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMX3A6NHT5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMX3A6NHT5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMX3A6NHT5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMX3A6NHT5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMX3A6NHT5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMX3A6NHT5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMX3A6NHT5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMX3A6NHT5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMX3A6NHT5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.84■□□□□ 0.61
HMX3A6NHT5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMX3A6NHT5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.84■□□□□ 0.61
HMX3A6NHT5 LINC01006-201ENST00000333319 2292 ntBASIC18.84■□□□□ 0.61
HMX3A6NHT5 AC244015.2-201ENST00000616358 1861 ntBASIC18.84■□□□□ 0.61
HMX3A6NHT5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMX3A6NHT5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMX3A6NHT5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMX3A6NHT5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMX3A6NHT5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HMX3A6NHT5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.83■□□□□ 0.6
HMX3A6NHT5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 AC009831.1-201ENST00000580420 1582 ntBASIC18.82■□□□□ 0.6
HMX3A6NHT5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMX3A6NHT5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.82■□□□□ 0.6
HMX3A6NHT5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMX3A6NHT5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.81■□□□□ 0.6
HMX3A6NHT5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.81■□□□□ 0.6
HMX3A6NHT5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMX3A6NHT5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMX3A6NHT5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.81■□□□□ 0.6
HMX3A6NHT5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMX3A6NHT5 AC133552.2-201ENST00000619106 1032 ntBASIC18.81■□□□□ 0.6
HMX3A6NHT5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMX3A6NHT5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMX3A6NHT5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMX3A6NHT5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMX3A6NHT5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMX3A6NHT5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms