Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV4A0A0C4DH28 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV4A0A0C4DH28 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 AL117328.2-201ENST00000624617 1940 ntBASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV4A0A0C4DH28 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 pRNA.6-201ENST00000610482 90 ntBASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 pRNA.5-201ENST00000612139 90 ntBASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 AC131212.1-201ENST00000613771 668 ntBASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 pRNA.11-201ENST00000618423 90 ntBASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 pRNA.13-201ENST00000619112 90 ntBASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV4A0A0C4DH28 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 LINC01960-201ENST00000563759 1884 ntBASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 GUSBP5-202ENST00000510805 1989 ntBASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 AL499627.2-201ENST00000606283 725 ntBASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV4A0A0C4DH28 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV4A0A0C4DH28 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.58■□□□□ 0.08
TRGV4A0A0C4DH28 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms