Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV5A0A0B4J1U4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRGV5A0A0B4J1U4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV5A0A0B4J1U4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV5A0A0B4J1U4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRGV5A0A0B4J1U4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV5A0A0B4J1U4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV5A0A0B4J1U4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRGV5A0A0B4J1U4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRGV5A0A0B4J1U4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRGV5A0A0B4J1U4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
TRGV5A0A0B4J1U4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
TRGV5A0A0B4J1U4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRGV5A0A0B4J1U4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRGV5A0A0B4J1U4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 TPRG1LP1-201ENST00000598702 760 ntBASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.64■□□□□ 0.73
TRGV5A0A0B4J1U4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 AC093323.1-202ENST00000635031 2045 ntBASIC19.63■□□□□ 0.73
TRGV5A0A0B4J1U4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV5A0A0B4J1U4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 AL137784.2-201ENST00000607332 1000 ntBASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV5A0A0B4J1U4 LINC01960-201ENST00000563759 1884 ntBASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV5A0A0B4J1U4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV5A0A0B4J1U4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.58■□□□□ 0.73
TRGV5A0A0B4J1U4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.58■□□□□ 0.72
TRGV5A0A0B4J1U4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.58■□□□□ 0.72
TRGV5A0A0B4J1U4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms