Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV9-1A0A075B6T8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-1A0A075B6T8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV9-1A0A075B6T8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAV9-1A0A075B6T8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV9-1A0A075B6T8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-1A0A075B6T8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-1A0A075B6T8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV9-1A0A075B6T8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-1A0A075B6T8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 AC044849.2-201ENST00000606596 710 ntBASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 LINC01971-201ENST00000617888 1048 ntBASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TRAV9-1A0A075B6T8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV9-1A0A075B6T8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV9-1A0A075B6T8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
TRAV9-1A0A075B6T8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 FEM1AP1-201ENST00000431297 1995 ntBASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-1A0A075B6T8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 AC087741.3-201ENST00000624270 1347 ntBASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV9-1A0A075B6T8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 AP006261.1-201ENST00000584783 668 ntBASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 AF106564.1-201ENST00000607058 2553 ntBASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV9-1A0A075B6T8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 AC144652.1-201ENST00000609974 1624 ntBASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV9-1A0A075B6T8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms