Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RN7SL736P-201ENST00000613111 269 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 LRRC37A7P-201ENST00000583900 2759 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC1A1P43005 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 TNKS-213ENST00000522110 2900 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 MRPL45-204ENST00000619548 1554 ntTSL 3 BASIC13.32□□□□□ -0.28
SLC1A1P43005 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC1A1P43005 COX6B2-209ENST00000590900 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 AL138762.1-201ENST00000608554 1637 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
SLC1A1P43005 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 AC092819.1-201ENST00000519981 1690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SLC1A1P43005 C11orf1-201ENST00000260276 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.31□□□□□ -0.28
SLC1A1P43005 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 PES1P1-201ENST00000508165 1736 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 ZNF384-203ENST00000361959 2978 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SLC1A1P43005 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 FAM47DP-201ENST00000402340 3290 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 C1S-203ENST00000402681 2522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC13.31□□□□□ -0.28
SLC1A1P43005 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 SNORA30.1-201ENST00000363193 129 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SLC1A1P43005 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC13.31□□□□□ -0.28
SLC1A1P43005 AC064836.1-201ENST00000405197 704 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 RPSAP6-201ENST00000417882 882 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.31□□□□□ -0.28
SLC1A1P43005 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 RN7SKP195-201ENST00000516587 303 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC13.31□□□□□ -0.28
SLC1A1P43005 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.31□□□□□ -0.28
SLC1A1P43005 DUT-207ENST00000559416 635 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 RN7SL555P-201ENST00000584742 339 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC13.31□□□□□ -0.28
SLC1A1P43005 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.31□□□□□ -0.28
SLC1A1P43005 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.31□□□□□ -0.28
SLC1A1P43005 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC13.31□□□□□ -0.28
SLC1A1P43005 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC13.31□□□□□ -0.28
SLC1A1P43005 AC020917.3-201ENST00000621050 721 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.31□□□□□ -0.28
SLC1A1P43005 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.31□□□□□ -0.28
SLC1A1P43005 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SLC1A1P43005 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 NF2-207ENST00000397789 1857 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 SALL4P1-201ENST00000510352 1860 ntBASIC13.31□□□□□ -0.28
SLC1A1P43005 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SLC1A1P43005 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SLC1A1P43005 UTP14A-201ENST00000394422 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC1A1P43005 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 AC095350.1-201ENST00000443685 1711 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 MPI-208ENST00000563786 1707 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 LYSMD3-204ENST00000509384 1538 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms