Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO3Q8TAP4 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO3Q8TAP4 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LMO3Q8TAP4 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LMO3Q8TAP4 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO3Q8TAP4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LMO3Q8TAP4 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC13.53□□□□□ -0.24
LMO3Q8TAP4 NF2-207ENST00000397789 1857 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LMO3Q8TAP4 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 CASS4-201ENST00000360314 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LMO3Q8TAP4 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 KANK1P1-201ENST00000400619 1234 ntBASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AL357055.2-201ENST00000412567 434 ntBASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 TREX1-203ENST00000456089 629 ntTSL 3 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AL139339.2-201ENST00000608063 657 ntBASIC13.52□□□□□ -0.25
LMO3Q8TAP4 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC13.52□□□□□ -0.25
LMO3Q8TAP4 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AC004585.2-201ENST00000624090 1473 ntBASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 AC078850.1-201ENST00000514265 1623 ntTSL 2 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 PIK3C3-210ENST00000589056 2074 ntTSL 2 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 MRVI1-215ENST00000541483 2468 ntTSL 2 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 DCK-204ENST00000504952 2614 ntTSL 3 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 TTYH2-201ENST00000269346 3490 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LMO3Q8TAP4 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 MCU-204ENST00000536019 3224 ntTSL 2 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 MASTL-201ENST00000342386 2968 ntTSL 2 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 TYRO3P-201ENST00000558165 2705 ntBASIC13.51□□□□□ -0.25
LMO3Q8TAP4 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 ASTN2-203ENST00000341734 1757 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 AOX3P-202ENST00000469595 1471 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 CD1C-201ENST00000368170 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.51□□□□□ -0.25
LMO3Q8TAP4 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 FAM47DP-201ENST00000402340 3290 ntBASIC13.51□□□□□ -0.25
LMO3Q8TAP4 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LMO3Q8TAP4 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms