Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.33□□□□□ -0.27
MTHFRP42898 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
MTHFRP42898 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
MTHFRP42898 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 SEPT4-203ENST00000393086 1556 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC13.33□□□□□ -0.28
MTHFRP42898 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC13.33□□□□□ -0.28
MTHFRP42898 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.33□□□□□ -0.28
MTHFRP42898 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
MTHFRP42898 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
MTHFRP42898 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
MTHFRP42898 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 AL355493.1-201ENST00000422707 808 ntBASIC13.33□□□□□ -0.28
MTHFRP42898 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC13.33□□□□□ -0.28
MTHFRP42898 TGIF2P1-201ENST00000435390 685 ntBASIC13.33□□□□□ -0.28
MTHFRP42898 OR7E33P-201ENST00000437705 966 ntBASIC13.33□□□□□ -0.28
MTHFRP42898 AL663070.1-201ENST00000438210 725 ntBASIC13.33□□□□□ -0.28
MTHFRP42898 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC13.33□□□□□ -0.28
MTHFRP42898 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 AC090095.1-201ENST00000519275 871 ntBASIC13.33□□□□□ -0.28
MTHFRP42898 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC13.33□□□□□ -0.28
MTHFRP42898 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC13.33□□□□□ -0.28
MTHFRP42898 RN7SL322P-201ENST00000583519 299 ntBASIC13.33□□□□□ -0.28
MTHFRP42898 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC13.33□□□□□ -0.28
MTHFRP42898 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 AC018755.1-201ENST00000601315 1182 ntBASIC13.33□□□□□ -0.28
MTHFRP42898 AC104440.1-201ENST00000605010 343 ntBASIC13.33□□□□□ -0.28
MTHFRP42898 AL121992.3-201ENST00000606186 346 ntBASIC13.33□□□□□ -0.28
MTHFRP42898 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 PRSS2-205ENST00000632998 817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 LIN28B-AS1-204ENST00000636951 610 ntTSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 AC105219.4-201ENST00000529743 1809 ntTSL 3 BASIC13.33□□□□□ -0.28
MTHFRP42898 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
MTHFRP42898 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
MTHFRP42898 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
MTHFRP42898 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MTHFRP42898 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
MTHFRP42898 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 AL662907.1-201ENST00000622988 1360 ntBASIC13.32□□□□□ -0.28
MTHFRP42898 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC13.32□□□□□ -0.28
MTHFRP42898 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.32□□□□□ -0.28
MTHFRP42898 AC073862.5-201ENST00000624129 2027 ntBASIC13.32□□□□□ -0.28
MTHFRP42898 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.32□□□□□ -0.28
MTHFRP42898 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC13.32□□□□□ -0.28
MTHFRP42898 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.32□□□□□ -0.28
MTHFRP42898 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 MRGPRX1-201ENST00000302797 1190 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
MTHFRP42898 RN7SKP170-201ENST00000362550 328 ntBASIC13.32□□□□□ -0.28
MTHFRP42898 MEOX1-203ENST00000393661 1206 ntTSL 3 BASIC13.32□□□□□ -0.28
MTHFRP42898 KRT41P-201ENST00000393988 1293 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms